RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 RPS4Y2Q8TD47 263 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 BCAS4Q8TDM0 211 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 NSMCE2Q96MF7 247 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 WWC2-AS2Q96NR7 200 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 OR8B4Q96RC9 309 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 MYLK2Q9H1R3 596 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 C1orf21Q9H246 121 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 NIPAL2Q9H841 368 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 GPR173Q9NS66 373 aa9.58□□□□□ -0.88
HDAC6-219ENST00000476625 GAR1Q9NY12 217 aaKnown RBP9.58□□□□□ -0.88
HDAC6-219ENST00000476625 TCRBV4S1A1TA0A5B7 111 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 FAM172BPA6NC97 362 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 RIIAD1A6NNX1 92 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 H3BSH0 61 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 F2RL2O00254 374 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 MAGEB4O15481 346 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-219ENST00000476625 GMNNO75496 209 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 MMP23AO75900 390 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 TK1P04183 234 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 PGA5P0DJD9 388 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF3P17036 446 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 COL10A1Q03692 680 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 SLC34A1Q06495 639 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF626Q68DY1 528 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 RPL13AP3Q6NVV1 102 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 ETV3LQ6ZN32 361 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 COMMD2Q86X83 199 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-219ENST00000476625 OR2T33Q8NG76 320 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 OTOSQ8NHW6 89 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 OR51E1Q8TCB6 317 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 HIST1H2AAQ96QV6 131 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 RGCCQ9H4X1 137 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 VIPAS39Q9H9C1 493 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 GPR84Q9NQS5 396 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 CMC2Q9NRP2 79 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 FAM206AQ9NX38 181 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 IL36RNQ9UBH0 155 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 MAGEL2Q9UJ55 1249 aa9.57□□□□□ -0.88
HDAC6-219ENST00000476625 SLC1A7O00341 560 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 CCDC22O60826 627 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 LPLP06858 475 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 CHRM2P08172 466 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 MRPL3P09001 348 aaKnown RBP9.56□□□□□ -0.88
HDAC6-219ENST00000476625 IGHV1-8P0DP01 117 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 HSD17B1P14061 328 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 H2AFXP16104 143 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-219ENST00000476625 HAAOP46952 286 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 HMGA2P52926 109 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 EDDM3BP56851 147 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 SLC35A2P78381 396 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 EDDM3AQ14507 147 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 SAMD4BQ5PRF9 694 aaKnown RBP9.56□□□□□ -0.88
HDAC6-219ENST00000476625 UTF1Q5T230 341 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 PLEKHG7Q6ZR37 379 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 ANGPTL5Q86XS5 388 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 CALHM1Q8IU99 346 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 FTMTQ8N4E7 242 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 LINC00482Q8N8I6 264 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 ASCC1Q8N9N2 400 aaKnown RBP9.56□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF671Q8TAW3 534 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 TRMT10AQ8TBZ6 339 aaKnown RBP9.56□□□□□ -0.88
HDAC6-219ENST00000476625 CDRT15Q96T59 188 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 TEAD3Q99594 435 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 COPS3Q9UNS2 423 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 PIGLQ9Y2B2 252 aa9.56□□□□□ -0.88
HDAC6-219ENST00000476625 DYNC2H1Q8NCM8 4307 aaKnown RBP9.55□□□□□ -0.88
HDAC6-219ENST00000476625 TCRBV5S2A0A599 114 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 TMEM82A0PJX8 343 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 NDUFAB1O14561 156 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 NXPH2O95156 264 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 IFNGP01579 166 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 IGLV3-1P01715 115 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 APOC1P02654 83 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 CALCBP10092 127 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 MAP2K3P46734 347 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ACTA2P62736 377 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ACTG2P63267 376 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ACTC1P68032 377 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ACTA1P68133 377 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 EGFEM1PQ0D2K5 195 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 SMIM21Q3B7S5 101 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ABCA11PQ4W5N1 156 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ASRGL1Q7L266 308 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 SHFQ7M4L6 423 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 CENPVQ7Z7K6 275 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-219ENST00000476625 TMEM179BQ7Z7N9 219 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF561Q8N587 486 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 OR5A2Q8NGI9 324 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 MALSU1Q96EH3 234 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 DUX3Q96PT4 197 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 B9D2Q9BPU9 175 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ELAC2Q9BQ52 826 aaKnown RBP9.55□□□□□ -0.88
HDAC6-219ENST00000476625 NRIP2Q9BQI9 281 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF649Q9BS31 505 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 PBOV1Q9GZY1 135 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 ABCB9Q9NP78 766 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 BAIAP2Q9UQB8 552 aa9.55□□□□□ -0.88
HDAC6-219ENST00000476625 TBL2Q9Y4P3 447 aaKnown RBP9.55□□□□□ -0.88
HDAC6-219ENST00000476625 RYR2Q92736 4967 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms