RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.12□□□□□ -0.31
APOBEC3F-203ENST00000476513 RBP4P02753 201 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 ZNF728P0DKX0 622 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 COX4I1P13073 169 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 RRM2P31350 389 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 NUDT2P50583 147 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 DGCR2P98153 550 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 KLHL22Q53GT1 634 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 MINOS1Q5TGZ0 78 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 CGB2Q6NT52 195 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 C16orf82Q7Z2V1 217 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR8B12Q8NGG6 310 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR5A2Q8NGI9 324 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 PYURFQ96I23 114 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR8B4Q96RC9 309 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 MCRIP2Q9BUT9 160 aaKnown RBP13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 MINOS1-NBL1R4GNA1 71 aa13.11□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR5B21A6NL26 309 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 H0YHG0 523 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 H3BUI4 141 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 NDUFAB1O14561 156 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 GSTT1P30711 240 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 THBS3P49746 956 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 ABCA11PQ4W5N1 156 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 CASC10Q5T4H9 136 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 SHFQ7M4L6 423 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 PIGWQ7Z7B1 504 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR9Q2Q8NGE9 314 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR51D1Q8NGF3 324 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR4Q3Q8NH05 313 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 FAM81AQ8TBF8 368 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 TFAP2CQ92754 450 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 ZNF649Q9BS31 505 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 BTBD10Q9BSF8 475 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 TSSK6Q9BXA6 273 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 LIN7BQ9HAP6 207 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 TBC1D23Q9NUY8 699 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 ABCD2Q9UBJ2 740 aa13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 LSM4Q9Y4Z0 139 aaKnown RBP13.1□□□□□ -0.31
APOBEC3F-203ENST00000476513 SH2D7A6NKC9 451 aaPredicted RBP13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 HMGB1P1B2RPK0 211 aaPredicted RBP13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 ZFPL1O95159 310 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 PGA5P0DJD9 388 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 CD24P25063 80 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 MAP2K3P46734 347 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 ACTA2P62736 377 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 ACTG2P63267 376 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 ACTC1P68032 377 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 ACTA1P68133 377 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 HACD2Q6Y1H2 254 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 RASSF6Q6ZTQ3 369 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 MOB3CQ70IA8 216 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 NDNFQ8TB73 568 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 AKR1E2Q96JD6 320 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 MED20Q9H944 212 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 EFCAB1Q9HAE3 211 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 FGFR1OP2Q9NVK5 253 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 ZMAT5Q9UDW3 170 aaKnown RBP13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 OR14J1Q9UGF5 321 aa13.09□□□□□ -0.31
APOBEC3F-203ENST00000476513 K7N7A8 449 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 NXPH2O95156 264 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 PSMA6P60900 246 aaKnown RBP13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 PLCXD3Q63HM9 321 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 BATF2Q8N1L9 274 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 MUC7Q8TAX7 377 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 CAPSLQ8WWF8 208 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 ASCL2Q99929 193 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 NRIP2Q9BQI9 281 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 GORASP2Q9H8Y8 452 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 GAR1Q9NY12 217 aaKnown RBP13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 BAIAP2Q9UQB8 552 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 SACSQ9NZJ4 4579 aa13.08□□□□□ -0.32
APOBEC3F-203ENST00000476513 IGHV2-26A0A0B4J1V2 119 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 FAM183AA6NL82 134 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 J3QT63 122 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 NOS1APO75052 506 aaPredicted RBP13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 GMNNO75496 209 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 GASTP01350 101 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 AMY1AP04745 511 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 AMY2AP04746 511 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 FABP3P05413 133 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 LYNP07948 512 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 EDDM3BP56851 147 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 PSME3P61289 254 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 TCF23Q7RTU1 214 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 OSR2Q8N2R0 312 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 OTOSQ8NHW6 89 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 BCAS4Q8TDM0 211 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 THEM6Q8WUY1 208 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 MCUR1Q96AQ8 359 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 SLC25A33Q9BSK2 321 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 ARMC1Q9NVT9 282 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 VNN3Q9NY84 501 aa13.07□□□□□ -0.32
APOBEC3F-203ENST00000476513 RIIAD1A6NNX1 92 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 RAMP3O60896 148 aa13.06□□□□□ -0.32
APOBEC3F-203ENST00000476513 SOX14O95416 240 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms