RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RGS6P49758 472 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 TOMM34Q15785 309 aaPredicted RBP3.26□□□□□ -1.89
VPS50-212ENST00000476413 LINC00303Q3SY05 128 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 DNLZQ5SXM8 178 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 FAHD1Q6P587 224 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 IGFL1Q6UW32 110 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 ORMDL3Q8N138 153 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 RNF182Q8N6D2 247 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 NT5CQ8TCD5 201 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 MRPL48Q96GC5 212 aaKnown RBP3.26□□□□□ -1.89
VPS50-212ENST00000476413 ADTRPQ96IZ2 230 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 GLT1D1Q96MS3 346 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 SPACA5Q96QH8 159 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 CSNK1G1Q9HCP0 422 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 ZNF302Q9NR11 478 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 ORC6Q9Y5N6 252 aa3.26□□□□□ -1.89
VPS50-212ENST00000476413 TRIP11Q15643 1979 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 SETD1AO15047 1707 aaKnown RBP3.25□□□□□ -1.89
VPS50-212ENST00000476413 ISPDA4D126 451 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 E7EWF7 191 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 ZNF593O00488 134 aaPredicted RBP3.25□□□□□ -1.89
VPS50-212ENST00000476413 ZMPSTE24O75844 475 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 LCN1P31025 176 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 DEKP35659 375 aaKnown RBP3.25□□□□□ -1.89
VPS50-212ENST00000476413 ARR3P36575 388 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 HADHBP55084 474 aaKnown RBP3.25□□□□□ -1.89
VPS50-212ENST00000476413 IL5RAQ01344 420 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 FBXO48Q5FWF7 155 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 ACTL10Q5JWF8 245 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 MORN3Q6PF18 240 aaPredicted RBP3.25□□□□□ -1.89
VPS50-212ENST00000476413 ST13P4Q8IZP2 240 aaPredicted RBP3.25□□□□□ -1.89
VPS50-212ENST00000476413 MIR7-3HGQ8N6C7 128 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 LRRC52Q8N7C0 313 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 OR4K2Q8NGD2 314 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 CDKL2Q92772 493 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 HGDQ93099 445 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 GPR82Q96P67 336 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 TMED9Q9BVK6 235 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 ULBP2Q9BZM5 246 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 ING2Q9H160 280 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 PORCNQ9H237 461 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 VAPAQ9P0L0 249 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 CLEC2DQ9UHP7 191 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 STK38LQ9Y2H1 464 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 AP3M1Q9Y2T2 418 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 ENPP4Q9Y6X5 453 aa3.25□□□□□ -1.89
VPS50-212ENST00000476413 SVILO95425 2214 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 IGHV3OR16-8A0A075B7F1 116 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 LOC100506127A0A0U1RQW1 187 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 SLC5A10A0PJK1 596 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 C16orf90A8MZG2 172 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 UPK1AO00322 258 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 CD8AP01732 235 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 C2orf80Q0P641 193 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 Q3ZCU0 254 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 KPRPQ5T749 579 aaPredicted RBP3.24□□□□□ -1.89
VPS50-212ENST00000476413 PRNTQ86SH4 94 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 RBM45Q8IUH3 476 aaKnown RBP3.24□□□□□ -1.89
VPS50-212ENST00000476413 BBS7Q8IWZ6 715 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 GAPTQ8N292 157 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 OR52N1Q8NH53 320 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 LRRC20Q8TCA0 184 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 TNFRSF14Q92956 283 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 PDCD1LG2Q9BQ51 273 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 SCRT1Q9BWW7 348 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 MS4A8Q9BY19 250 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 SHCBP1LQ9BZQ2 653 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 PRORYQ9H606 182 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 ACOT13Q9NPJ3 140 aa3.24□□□□□ -1.89
VPS50-212ENST00000476413 OR7C2O60412 319 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 NPHP4O75161 1426 aaPredicted RBP3.23□□□□□ -1.89
VPS50-212ENST00000476413 SCO1O75880 301 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 ZNF14P17017 642 aaPredicted RBP3.23□□□□□ -1.89
VPS50-212ENST00000476413 OR12D2P58182 307 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 ADIGQ0VDE8 80 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 LAMTOR4Q0VGL1 99 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 FUT5Q11128 374 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 PMVKQ15126 192 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 ZNF678Q5SXM1 525 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 THOC7Q6I9Y2 204 aaKnown RBP3.23□□□□□ -1.89
VPS50-212ENST00000476413 PRSS54Q6PEW0 395 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 NELFCDQ8IXH7 590 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 RNF10Q8N5U6 811 aaKnown RBP3.23□□□□□ -1.89
VPS50-212ENST00000476413 OR6K2Q8NGY2 324 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 ZNF420Q8TAQ5 688 aaPredicted RBP3.23□□□□□ -1.89
VPS50-212ENST00000476413 KLF14Q8TD94 323 aaPredicted RBP3.23□□□□□ -1.89
VPS50-212ENST00000476413 RMI2Q96E14 147 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 VCX3AQ9NNX9 186 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 SDHAF2Q9NX18 166 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 RAB23Q9ULC3 237 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 GPR179Q6PRD1 2367 aa3.23□□□□□ -1.89
VPS50-212ENST00000476413 A0A1W2PQ67 120 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 MGAT4DA6NG13 374 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 CEACAM18A8MTB9 384 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 A8MWL6 223 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 MAS1P04201 325 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 GUSBP1Q15486 140 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 CEACAM16Q2WEN9 425 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 SYT6Q5T7P8 510 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms