RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 HMGN1P05114 100 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 RAP2AP10114 183 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 PRDX2P32119 198 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 MNAT1P51948 309 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 TRIM25Q14258 630 aaKnown RBP20.16■□□□□ 0.82
TMEM54-205ENST00000475208 HABP2Q14520 560 aaPredicted RBP20.16■□□□□ 0.82
TMEM54-205ENST00000475208 ZNF273Q14593 569 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 PLA1AQ53H76 456 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 OXLD1Q5BKU9 147 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 ZNF782Q6ZMW2 699 aaPredicted RBP20.16■□□□□ 0.82
TMEM54-205ENST00000475208 LHFPL4Q7Z7J7 247 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 ARHGAP24Q8N264 748 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 OR51E1Q8TCB6 317 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 ITFG2Q969R8 447 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 PBOV1Q9GZY1 135 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 C1orf21Q9H246 121 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 SERTAD4Q9NUC0 356 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 PIGLQ9Y2B2 252 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 NOTCH3Q9UM47 2321 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 B2RBV5 119 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 SYNGR1O43759 233 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 XPNPEP2O43895 674 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 SLC2A5P22732 501 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 ZBTB37Q5TC79 503 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 KCTD18Q6PI47 426 aaPredicted RBP20.15■□□□□ 0.82
TMEM54-205ENST00000475208 DEGS2Q6QHC5 323 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 TMEM179BQ7Z7N9 219 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 OR4S1Q8NGB4 309 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 OR2T27Q8NH04 317 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 MRAPQ8TCY5 172 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 TEAD3Q99594 435 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 YIPF3Q9GZM5 350 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 ENPP5Q9UJA9 477 aa20.15■□□□□ 0.82
TMEM54-205ENST00000475208 VGLL3A8MV65 326 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 J3QT63 122 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 IGLV3-1P01715 115 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 PGA5P0DJD9 388 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 CD28P10747 220 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 HAAOP46952 286 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 CDK5Q00535 292 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 APOFQ13790 326 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 ZNF684Q5T5D7 378 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 DYNAPQ8N1N2 210 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 Q8N2B8 174 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 CHID1Q9BWS9 393 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 MROQ9BYG7 248 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 MMP28Q9H239 520 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 TCF19Q9Y242 345 aa20.14■□□□□ 0.81
TMEM54-205ENST00000475208 FAM90A8PA6NJQ4 464 aa20.13■□□□□ 0.81
TMEM54-205ENST00000475208 PRR32B1ATL7 298 aa20.13■□□□□ 0.81
TMEM54-205ENST00000475208 NRASP01111 189 aa20.13■□□□□ 0.81
TMEM54-205ENST00000475208 MRPL3P09001 348 aaKnown RBP20.13■□□□□ 0.81
TMEM54-205ENST00000475208 OSMP13725 252 aa20.13■□□□□ 0.81
TMEM54-205ENST00000475208 BATF2Q8N1L9 274 aa20.13■□□□□ 0.81
TMEM54-205ENST00000475208 LRGUKQ96M69 825 aa20.13■□□□□ 0.81
TMEM54-205ENST00000475208 TTTY10Q9BZA0 68 aa20.13■□□□□ 0.81
TMEM54-205ENST00000475208 POLDIP2Q9Y2S7 368 aa20.13■□□□□ 0.81
TMEM54-205ENST00000475208 DHRS3O75911 302 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 NXPH2O95156 264 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 PIPP12273 146 aaPredicted RBP20.12■□□□□ 0.81
TMEM54-205ENST00000475208 RAB13P51153 203 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 EMX1Q04741 257 aaPredicted RBP20.12■□□□□ 0.81
TMEM54-205ENST00000475208 MFGE8Q08431 387 aaPredicted RBP20.12■□□□□ 0.81
TMEM54-205ENST00000475208 ZNF829Q3KNS6 432 aaPredicted RBP20.12■□□□□ 0.81
TMEM54-205ENST00000475208 CCBE1Q6UXH8 406 aaPredicted RBP20.12■□□□□ 0.81
TMEM54-205ENST00000475208 TMEM219Q86XT9 240 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 NDUFA11Q86Y39 141 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 ZNF573Q86YE8 665 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 FOXRED1Q96CU9 486 aaPredicted RBP20.12■□□□□ 0.81
TMEM54-205ENST00000475208 R3HDM4Q96D70 268 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 OR8B4Q96RC9 309 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 NRIP2Q9BQI9 281 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 ZNF556Q9HAH1 456 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 NECAP2Q9NVZ3 263 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 OR14J1Q9UGF5 321 aa20.12■□□□□ 0.81
TMEM54-205ENST00000475208 NUFIP1Q9UHK0 495 aaKnown RBP20.12■□□□□ 0.81
TMEM54-205ENST00000475208 GNGT2O14610 69 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 NOS1APO75052 506 aaPredicted RBP20.11■□□□□ 0.81
TMEM54-205ENST00000475208 ZNF254O75437 659 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 TK1P04183 234 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 ARG1P05089 322 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 LOXL3P58215 753 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 ROM1Q03395 351 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 CNN3Q15417 329 aaKnown RBP20.11■□□□□ 0.81
TMEM54-205ENST00000475208 TMEM236Q5W0B7 351 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 CALHM1Q8IU99 346 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 ZNF679Q8IYX0 411 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 ADGRG5Q8IZF4 528 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 HS3ST5Q8IZT8 346 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 RPS4Y2Q8TD47 263 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 SGCDQ92629 289 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 CCDC124Q96CT7 223 aaKnown RBP20.11■□□□□ 0.81
TMEM54-205ENST00000475208 CITED2Q99967 270 aaPredicted RBP20.11■□□□□ 0.81
TMEM54-205ENST00000475208 CDCA4Q9BXL8 241 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 ABCB10Q9NRK6 738 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 GPR173Q9NS66 373 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 COPS3Q9UNS2 423 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 TBL2Q9Y4P3 447 aaKnown RBP20.11■□□□□ 0.81
TMEM54-205ENST00000475208 DNAH3Q8TD57 4116 aa20.11■□□□□ 0.81
TMEM54-205ENST00000475208 A6NDX4 124 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms