RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 SFRP4Q6FHJ7 346 aaPredicted RBP16.98■□□□□ 0.31
SSR1-204ENST00000474597 CALHM1Q8IU99 346 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 C1orf174Q8IYL3 243 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 OSR2Q8N2R0 312 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 OR8S1Q8NH09 359 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 Q96M66 194 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 VKORC1Q9BQB6 163 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 NUDT15Q9NV35 164 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 LILRA1O75019 489 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 NAAAQ02083 359 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 PNLIPRP3Q17RR3 467 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 C3orf36Q3SXR2 165 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 PLAC9Q5JTB6 97 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 KLF14Q8TD94 323 aaPredicted RBP16.98■□□□□ 0.31
SSR1-204ENST00000474597 NUDCD2Q8WVJ2 157 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 MRPS24Q96EL2 167 aaKnown RBP16.98■□□□□ 0.31
SSR1-204ENST00000474597 ARHGAP5-AS1Q96IT6 56 aa16.98■□□□□ 0.31
SSR1-204ENST00000474597 NOP16Q9Y3C1 178 aaKnown RBP16.98■□□□□ 0.31
SSR1-204ENST00000474597 MAP1BP46821 2468 aaKnown RBP16.98■□□□□ 0.31
SSR1-204ENST00000474597 TRAV6A0A075B6T7 132 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 IGKV1-12A0A0C4DH73 117 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 IQCF6A8MYZ5 107 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 IGKV1D-12P01611 117 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 HNRNPCP07910 306 aaKnown RBP eCLIP16.97■□□□□ 0.319e-7■■□□□ 12.4
SSR1-204ENST00000474597 TMEM50BP56557 158 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 GNG3P63215 75 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 TATDN3Q17R31 274 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 TMEM255AQ5JRV8 349 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 AGAP6Q5VW22 663 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 FAAP20Q6NZ36 180 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 STEAP1BQ6NZ63 245 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 MKXQ8IYA7 352 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 TMEM229BQ8NBD8 167 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 ST6GALNAC3Q8NDV1 305 aa16.97■□□□□ 0.31
SSR1-204ENST00000474597 MARS2Q96GW9 593 aaKnown RBP16.97■□□□□ 0.31
SSR1-204ENST00000474597 USB1Q9BQ65 265 aaKnown RBP16.97■□□□□ 0.31
SSR1-204ENST00000474597 ZNF107Q9UII5 783 aaPredicted RBP16.97■□□□□ 0.31
SSR1-204ENST00000474597 MED19A0JLT2 244 aaPredicted RBP16.96■□□□□ 0.31
SSR1-204ENST00000474597 DHFRP00374 187 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 CD3DP04234 171 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 GCH1P30793 250 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 CALCRP30988 508 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 RAB25P57735 213 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 PSG7Q13046 419 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 ARFRP1Q13795 201 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 ZNF718Q3SXZ3 478 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 ZNF782Q6ZMW2 699 aaPredicted RBP16.96■□□□□ 0.31
SSR1-204ENST00000474597 ZNF573Q86YE8 665 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 SAXO1Q8IYX7 474 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 RELL2Q8NC24 303 aaPredicted RBP16.96■□□□□ 0.31
SSR1-204ENST00000474597 OR4C16Q8NGL9 310 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 MICU1Q9BPX6 476 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 NEURL2Q9BR09 285 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 RTL8AQ9BWD3 113 aa16.96■□□□□ 0.31
SSR1-204ENST00000474597 FGF23Q9GZV9 251 aaPredicted RBP16.96■□□□□ 0.31
SSR1-204ENST00000474597 C16orf97H3BN30 126 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 MFNGO00587 321 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 CRYAAP02489 173 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 MPV17P39210 176 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 BTG1P62324 171 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 BTN2A1Q7KYR7 527 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 LIX1LQ8IVB5 337 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 PECRQ9BY49 303 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 PLEKHJ1Q9NW61 149 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 NPAP1Q9NZP6 1156 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 MEMO1Q9Y316 297 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 SPEF1Q9Y4P9 236 aa16.96■□□□□ 0.3
SSR1-204ENST00000474597 ZNF736B4DX44 427 aaPredicted RBP16.95■□□□□ 0.3
SSR1-204ENST00000474597 RAB3DO95716 219 aa16.95■□□□□ 0.3
SSR1-204ENST00000474597 TAF9Q16594 264 aa16.95■□□□□ 0.3
SSR1-204ENST00000474597 NKAPLQ5M9Q1 402 aa16.95■□□□□ 0.3
SSR1-204ENST00000474597 RTN4RL2Q86UN3 420 aa16.95■□□□□ 0.3
SSR1-204ENST00000474597 SLAMF9Q96A28 289 aa16.95■□□□□ 0.3
SSR1-204ENST00000474597 DMRTA2Q96SC8 542 aa16.95■□□□□ 0.3
SSR1-204ENST00000474597 ADAT1Q9BUB4 502 aaKnown RBP16.95■□□□□ 0.3
SSR1-204ENST00000474597 PRR14LQ5THK1 2151 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 TRAPPC2LH3BP13 241 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 TIMM8AO60220 97 aaPredicted RBP16.94■□□□□ 0.3
SSR1-204ENST00000474597 SFTPBP07988 381 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 H2AFB2P0C5Z0 115 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 HLA-DMAP28067 261 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 LY6DQ14210 128 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 HAGHLQ6PII5 290 aaPredicted RBP16.94■□□□□ 0.3
SSR1-204ENST00000474597 FBXL14Q8N1E6 418 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSR1-204ENST00000474597 NKIRAS2Q9NYR9 191 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 JKAMPQ9P055 326 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 PURGQ9UJV8 347 aaKnown RBP16.94■□□□□ 0.3
SSR1-204ENST00000474597 ST3GAL6Q9Y274 331 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 KCNK7Q9Y2U2 307 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 ESPL1Q14674 2120 aa16.94■□□□□ 0.3
SSR1-204ENST00000474597 FOXI3A8MTJ6 420 aaPredicted RBP16.93■□□□□ 0.3
SSR1-204ENST00000474597 SERPINE3A8MV23 424 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 CA7P43166 264 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 CBX5P45973 191 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 FABP6P51161 128 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 OR8G1Q15617 311 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 PIGYQ3MUY2 71 aa16.93■□□□□ 0.3
SSR1-204ENST00000474597 RGS7BPQ6MZT1 257 aaPredicted RBP16.93■□□□□ 0.3
SSR1-204ENST00000474597 AKAP14Q86UN6 197 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms