RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 SECTM1Q8WVN6 248 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 ASB10Q8WXI3 467 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 NKD1Q969G9 470 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 MRGPRFQ96AM1 343 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 RAB39BQ96DA2 213 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 SLAMF6Q96DU3 332 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 TVP23CQ96ET8 276 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 MARS2Q96GW9 593 aaKnown RBP7.09□□□□□ -1.27
CCDC93-208ENST00000474546 MRGPRX1Q96LB2 322 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 GPER1Q99527 375 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 P2RX4Q99571 388 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 SSX3Q99909 188 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 RTBDNQ9BSG5 229 aaPredicted RBP7.09□□□□□ -1.27
CCDC93-208ENST00000474546 ANGPTL4Q9BY76 406 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 SDHAF3Q9NRP4 125 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 SERINC1Q9NRX5 453 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 ALKBH4Q9NXW9 302 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 EHFQ9NZC4 300 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 OR5AC2Q9NZP5 309 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 GSKIPQ9P0R6 139 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 PITPNC1Q9UKF7 332 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 MGAQ8IWI9 3026 aa7.09□□□□□ -1.27
CCDC93-208ENST00000474546 SPENQ96T58 3664 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 LOC100509620A0A075B734 347 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 TRAV1-1A0A0B4J248 108 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 A0A0U1RQV5 110 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 PMS2P1A4D2B8 440 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 LRP5LA4QPB2 252 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 HIDE1A8MVS5 230 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 C17orf105B2RV13 164 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 RPL36A-HNRNPH2H7BZ11 118 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 H7C1Q1 480 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 PITX3O75364 302 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 MPIG6BO95866 241 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 CRYABP02511 175 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 TTRP02766 147 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 OPN1MWP04001 364 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 OR5AC1P0C628 307 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 PGA3P0DJD8 388 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 OPN1MW2P0DN77 364 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 OPN1MW3P0DN78 364 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 OR5H8P0DN80 308 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 NQO2P16083 231 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 CTLA4P16410 223 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 GNB3P16520 340 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 FGF7P21781 194 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 CTSSP25774 331 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 ITGA3P26006 1051 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 CEACAM6P40199 344 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 NPY4RP50391 375 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 SUPT4H1P63272 117 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 SRSF3P84103 164 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 HGFACQ04756 655 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 PLCXD2Q0VAA5 305 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 UBE2V2Q15819 145 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 ANKRD55Q3KP44 614 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 ADAM5Q6NVV9 412 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 LRRC69Q6ZNQ3 347 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 BOLLQ8N9W6 283 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 BEND2Q8NDZ0 799 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 DEFB124Q8NES8 71 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 OR5T3Q8NGG3 340 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 RNASEH2CQ8TDP1 164 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 OR1E3Q8WZA6 343 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 GTF3AQ92664 365 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 TMEM230Q96A57 120 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 SPSB1Q96BD6 273 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 ZNF707Q96C28 371 aaPredicted RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 KCNK17Q96T54 332 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 NAA11Q9BSU3 229 aaPredicted RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 ADAT1Q9BUB4 502 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 TMEM231Q9H6L2 316 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 CHST11Q9NPF2 352 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 KLHL13Q9P2N7 655 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 DHCR7Q9UBM7 475 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 PADI1Q9ULC6 663 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 COA3Q9Y2R0 106 aaPredicted RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 POLR1DQ9Y2S0 133 aa7.08□□□□□ -1.28
CCDC93-208ENST00000474546 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
CCDC93-208ENST00000474546 NSG1A0A0A6YYJ2 146 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 A0A1B0GTH9 108 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 LOC102725191A0A1B0GVB3 256 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 A0A1W2PPH5 198 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 SMCO3A2RU48 225 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 RBFOX3A6NFN3 312 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 ANKUB1A6NFN9 424 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 MSGN1A6NI15 193 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 LILRA5A6NI73 299 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 A6NLC8 198 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 VSTM2BA6NLU5 285 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 FTCDNL1E5RQL4 147 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 C11orf98E9PRG8 122 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 MKRN2OSH3BPM6 223 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 H7C1C5 153 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 P2RY10O00398 339 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 DVL1O14640 695 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 PPIHO43447 177 aaKnown RBP7.07□□□□□ -1.28
CCDC93-208ENST00000474546 CRTAPO75718 401 aaPredicted RBP7.07□□□□□ -1.28
CCDC93-208ENST00000474546 GCGP01275 180 aa7.07□□□□□ -1.28
CCDC93-208ENST00000474546 IGHG1P01857 330 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms