RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 POC1AQ8NBT0 407 aa13.4□□□□□ -0.26
CPA4-205ENST00000474254 ZNF671Q8TAW3 534 aa13.4□□□□□ -0.26
CPA4-205ENST00000474254 GATAD2BQ8WXI9 593 aa13.4□□□□□ -0.26
CPA4-205ENST00000474254 UBE2FQ969M7 185 aa13.4□□□□□ -0.26
CPA4-205ENST00000474254 MED30Q96HR3 178 aa13.4□□□□□ -0.26
CPA4-205ENST00000474254 GPR173Q9NS66 373 aa13.4□□□□□ -0.26
CPA4-205ENST00000474254 SLC25A10Q9UBX3 287 aaPredicted RBP13.4□□□□□ -0.26
CPA4-205ENST00000474254 IGHV1-69DA0A0B4J2H0 117 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 A0A1B0GVI7 797 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 PQLC2LA1A4F0 135 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 EBAG9O00559 213 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 SYNGR1O43759 233 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 ENTPD6O75354 484 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 IGHV1-69P01742 117 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 ACAA1P09110 424 aaPredicted RBP13.39□□□□□ -0.27
CPA4-205ENST00000474254 PSG2P11465 335 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 CAV3P56539 151 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 ZNF85Q03923 595 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 ZIK1Q3SY52 487 aaPredicted RBP13.39□□□□□ -0.27
CPA4-205ENST00000474254 OLFML2AQ68BL7 652 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 BRICD5Q6PL45 260 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 FAM220AQ7Z4H9 259 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 ZNF573Q86YE8 665 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 TMEM86BQ8N661 226 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 WFDC12Q8WWY7 111 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 LHX4Q969G2 390 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 MBOAT4Q96T53 435 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 PLEKHA1Q9HB21 404 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 ACOXLQ9NUZ1 547 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 RASL12Q9NYN1 266 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 ONECUT1Q9UBC0 465 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 TGP01266 2768 aa13.39□□□□□ -0.27
CPA4-205ENST00000474254 ANKRD61A6NGH8 418 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 PGA5P0DJD9 388 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 MPZP25189 248 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 HAAOP46952 286 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 ACTC1P68032 377 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 ACTA1P68133 377 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 OCLNQ16625 522 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 ODF4Q2M2E3 257 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 SMIM21Q3B7S5 101 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 MEDAGQ5VYS4 303 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 METAP1DQ6UB28 335 aaPredicted RBP13.38□□□□□ -0.27
CPA4-205ENST00000474254 Q6YL49 198 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 ACP7Q6ZNF0 438 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 CMTM4Q8IZR5 234 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 CCDC54Q8NEL0 328 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 H1FXQ92522 213 aaKnown RBP13.38□□□□□ -0.27
CPA4-205ENST00000474254 RNF166Q96A37 237 aaPredicted RBP13.38□□□□□ -0.27
CPA4-205ENST00000474254 SDSLQ96GA7 329 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 C9orf16Q9BUW7 83 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 GNG8Q9UK08 70 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 POLDIP2Q9Y2S7 368 aa13.38□□□□□ -0.27
CPA4-205ENST00000474254 LOC107986453A0A1B0GWG9 222 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 A6NIN4 97 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 J3QRE1 110 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 M0QZ24 198 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 TIMM23O14925 209 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 SYT7O43581 403 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 NOS1APO75052 506 aaPredicted RBP13.37□□□□□ -0.27
CPA4-205ENST00000474254 NDUFA7O95182 113 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 MELTFP08582 738 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 UBCP0CG48 685 aaKnown RBP13.37□□□□□ -0.27
CPA4-205ENST00000474254 KIR3DL2P43630 455 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 GABRA2P47869 451 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 TP53I3Q53FA7 332 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 PRSS35Q8N3Z0 413 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 ZNRF1Q8ND25 227 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 RNFT2Q96EX2 444 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 ZNF488Q96MN9 340 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 NRIP2Q9BQI9 281 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 CHIAQ9BZP6 476 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 CHST5Q9GZS9 411 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 S100A14Q9HCY8 104 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 C1RLQ9NZP8 487 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 MAB21L2Q9Y586 359 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 POMT1Q9Y6A1 747 aa13.37□□□□□ -0.27
CPA4-205ENST00000474254 CLPSL1A2RUU4 121 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 H3BSH0 61 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 NDUFB7P17568 137 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 GABRB1P18505 474 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 SRSF4Q08170 494 aaKnown RBP13.36□□□□□ -0.27
CPA4-205ENST00000474254 CALHM1Q8IU99 346 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 PQLC1Q8N2U9 271 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 Q8N7P7 452 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 TMEM185AQ8NFB2 350 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 TBC1D15Q8TC07 691 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 SSMEM1Q8WWF3 244 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 PKIBQ9C010 78 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 ELL3Q9HB65 397 aaPredicted RBP13.36□□□□□ -0.27
CPA4-205ENST00000474254 HES4Q9HCC6 221 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 SIRT7Q9NRC8 400 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 GMPPBQ9Y5P6 360 aa13.36□□□□□ -0.27
CPA4-205ENST00000474254 TRBV23-1A0A0A0MS06 115 aa13.35□□□□□ -0.27
CPA4-205ENST00000474254 A0A0U1RQK1 487 aa13.35□□□□□ -0.27
CPA4-205ENST00000474254 DAPL1A0PJW8 107 aa13.35□□□□□ -0.27
CPA4-205ENST00000474254 RFPL4AA6NLU0 287 aa13.35□□□□□ -0.27
CPA4-205ENST00000474254 SNTNA6NMZ2 147 aa13.35□□□□□ -0.27
CPA4-205ENST00000474254 RFPL4AL1F8VTS6 287 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms