RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SLC2A12Q8TD20 617 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 YPEL2Q96QA6 119 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CCDC3Q9BQI4 270 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 EGLN3Q9H6Z9 239 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 MRPS16Q9Y3D3 137 aaKnown RBP4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 WIPI2Q9Y4P8 454 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 IGHV1-69-2A0A0G2JMI3 117 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 RBFOX3A6NFN3 312 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR7C2O60412 319 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 GRPP07492 148 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 PTHLHP12272 177 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF19P17023 458 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 FUT3P21217 361 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TUBG1P23258 451 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CRYBA4P53673 196 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 BIDP55957 195 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 S100A10P60903 97 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ZXDBP98169 803 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ID2Q02363 134 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 FOXF1Q12946 379 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CAPSQ13938 189 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 CDK5R1Q15078 307 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 EIPR1Q53HC9 387 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR4A47Q6IF82 309 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 RNF44Q7L0R7 432 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 GPR32P1Q8NGA4 272 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR10H4Q8NGA5 316 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 OR1K1Q8NGR3 316 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 MRGPRFQ96AM1 343 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SPSB1Q96BD6 273 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 APH1AQ96BI3 265 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SDSLQ96GA7 329 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC41A2Q96JW4 573 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 C4orf36Q96KX1 117 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SPXQ9BT56 116 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ABHD14AQ9BUJ0 271 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 GPR174Q9BXC1 333 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC46A2Q9BY10 475 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC39A8Q9C0K1 460 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 RAB18Q9NP72 206 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM9BQ9NQ34 198 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TUBG2Q9NRH3 451 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM106BQ9NUM4 274 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 ANKRD10Q9NXR5 420 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 KCNK6Q9Y257 313 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 RNF115Q9Y4L5 304 aa4.51□□□□□ -1.69
TMEM39A-206ENST00000473684 KCNE1BA0A087WTH5 132 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 BORCS7-ASMTA0A0B4J1R7 106 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 A0A1B0GU03 582 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 A0A1W2PRS3 328 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC38A8A6NNN8 435 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 FAM166BA8MTA8 275 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 J3QLW9 94 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 RBFOX2O43251 390 aaKnown RBP eCLIP4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PRAMEF11O60813 436 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 AGFG2O95081 481 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 SRP19P09132 144 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 OR10J4P0C629 311 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 CTSAP10619 480 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 HNRNPA3P51991 378 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PNLIPRP1P54315 467 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PAFAH1B2P68402 229 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 TCF15Q12870 199 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PPP1R1AQ13522 171 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 ELOCQ15369 112 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PRAMEF5Q5TYX0 476 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PRAMEF6Q5VXH4 476 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 FAM71F2Q6NXP2 309 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 FAM151BQ6UXP7 276 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 MRPL21Q7Z2W9 205 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 VASH2Q86V25 355 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 DND1Q8IYX4 353 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 BATF2Q8N1L9 274 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 SYS1Q8N2H4 156 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PNKDQ8N490 385 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 CYB561A3Q8NBI2 242 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 OR2T27Q8NH04 317 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF519Q8TB69 540 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 AQP3Q92482 292 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 FAM3CQ92520 227 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 SUSD6Q92537 303 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 FOXN4Q96NZ1 517 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 GFI1Q99684 422 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 GPA33Q99795 319 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 GABRG3Q99928 467 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 LINC00597Q9H2U6 94 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 WFDC1Q9HC57 220 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 A4GALTQ9NPC4 353 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 RXFP3Q9NSD7 469 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 PIN4Q9Y237 131 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 MYO10Q9HD67 2058 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 NUP205Q92621 2012 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 CKAP5Q14008 2032 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 C13orf42A0A1B0GVH6 325 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 G3V4G9 280 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 H0YL77 283 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 HCRTO43612 131 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 TBX19O60806 448 aa4.5□□□□□ -1.69
TMEM39A-206ENST00000473684 SMIM10L2AP0DMW4 78 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms