RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 CCDC197Q8NCU1 140 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 CCDC54Q8NEL0 328 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 TMEM185AQ8NFB2 350 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 OR2T6Q8NHC8 308 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 NRIP2Q9BQI9 281 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 NPFFR1Q9GZQ6 430 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 PPA2Q9H2U2 334 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 GPR84Q9NQS5 396 aa11.02□□□□□ -0.65
CHD3-209ENST00000473376 RFPL4AA6NLU0 287 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 RFPL4AL1F8VTS6 287 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 TSPAN15O95858 294 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 CRISP1P54107 249 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 ERVFRD-1P60508 538 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 ESRRGP62508 458 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 EFNB1P98172 346 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 SNAPC1Q16533 368 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 CEP78Q5JTW2 689 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 TMEM200BQ69YZ2 307 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 MOB3CQ70IA8 216 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 REC114Q7Z4M0 266 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 ELMOD2Q8IZ81 293 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 Q8N2B8 174 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 OR51E1Q8TCB6 317 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 CCDC124Q96CT7 223 aaKnown RBP11.01□□□□□ -0.65
CHD3-209ENST00000473376 CNN2Q99439 309 aaKnown RBP11.01□□□□□ -0.65
CHD3-209ENST00000473376 PKIBQ9C010 78 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 PIGLQ9Y2B2 252 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 TBL2Q9Y4P3 447 aaKnown RBP11.01□□□□□ -0.65
CHD3-209ENST00000473376 V9GYS6 101 aa11.01□□□□□ -0.65
CHD3-209ENST00000473376 TCRBV3S1A0A5B6 114 aa11□□□□□ -0.65
CHD3-209ENST00000473376 PQLC2LA1A4F0 135 aa11□□□□□ -0.65
CHD3-209ENST00000473376 CCDC182A6NF36 153 aa11□□□□□ -0.65
CHD3-209ENST00000473376 C17orf98A8MV24 154 aa11□□□□□ -0.65
CHD3-209ENST00000473376 ANGPTL7O43827 346 aa11□□□□□ -0.65
CHD3-209ENST00000473376 SRSF10O75494 262 aaKnown RBP11□□□□□ -0.65
CHD3-209ENST00000473376 TTRP02766 147 aa11□□□□□ -0.65
CHD3-209ENST00000473376 HAAOP46952 286 aa11□□□□□ -0.65
CHD3-209ENST00000473376 DYNLT3P51808 116 aa11□□□□□ -0.65
CHD3-209ENST00000473376 LGALS4P56470 323 aa11□□□□□ -0.65
CHD3-209ENST00000473376 GMFBP60983 142 aa11□□□□□ -0.65
CHD3-209ENST00000473376 ERVK11-1P61568 191 aa11□□□□□ -0.65
CHD3-209ENST00000473376 IL24Q13007 206 aa11□□□□□ -0.65
CHD3-209ENST00000473376 DNAL1Q4LDG9 190 aa11□□□□□ -0.65
CHD3-209ENST00000473376 PLCXD3Q63HM9 321 aa11□□□□□ -0.65
CHD3-209ENST00000473376 FAHD1Q6P587 224 aa11□□□□□ -0.65
CHD3-209ENST00000473376 FAM185AQ8N0U4 392 aa11□□□□□ -0.65
CHD3-209ENST00000473376 CD177Q8N6Q3 437 aa11□□□□□ -0.65
CHD3-209ENST00000473376 BBS1Q8NFJ9 593 aa11□□□□□ -0.65
CHD3-209ENST00000473376 PPP1R35Q8TAP8 253 aa11□□□□□ -0.65
CHD3-209ENST00000473376 PIFOQ8TCI5 191 aa11□□□□□ -0.65
CHD3-209ENST00000473376 PPP1R14AQ96A00 147 aa11□□□□□ -0.65
CHD3-209ENST00000473376 FOXRED1Q96CU9 486 aaPredicted RBP11□□□□□ -0.65
CHD3-209ENST00000473376 C10orf35Q96D05 121 aa11□□□□□ -0.65
CHD3-209ENST00000473376 MALSU1Q96EH3 234 aa11□□□□□ -0.65
CHD3-209ENST00000473376 THTPAQ9BU02 230 aa11□□□□□ -0.65
CHD3-209ENST00000473376 PAPOLBQ9NRJ5 636 aaKnown RBP11□□□□□ -0.65
CHD3-209ENST00000473376 C19orf12Q9NSK7 152 aa11□□□□□ -0.65
CHD3-209ENST00000473376 ENOPH1Q9UHY7 261 aa11□□□□□ -0.65
CHD3-209ENST00000473376 PITPNC1Q9UKF7 332 aa11□□□□□ -0.65
CHD3-209ENST00000473376 SNX5Q9Y5X3 404 aa11□□□□□ -0.65
CHD3-209ENST00000473376 K7N7A8 449 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 TK1P04183 234 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 FAHP16930 419 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 CCL1P22362 96 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 CAPZA1P52907 286 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 GYS2P54840 703 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 CBX1P83916 185 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 EMX1Q04741 257 aaPredicted RBP10.99□□□□□ -0.65
CHD3-209ENST00000473376 PTGES3Q15185 160 aaKnown RBP10.99□□□□□ -0.65
CHD3-209ENST00000473376 FBLN7Q53RD9 439 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 NXNL2Q5VZ03 156 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 ZNF322Q6U7Q0 402 aaPredicted RBP10.99□□□□□ -0.65
CHD3-209ENST00000473376 MEPCEQ7L2J0 689 aaKnown RBP10.99□□□□□ -0.65
CHD3-209ENST00000473376 COMMD2Q86X83 199 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 MKXQ8IYA7 352 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 PNKDQ8N490 385 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 OR11H6Q8NGC7 330 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 OR2T27Q8NH04 317 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 CLPTM1LQ96KA5 538 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 CLN6Q9NWW5 311 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 TVP23BQ9NYZ1 205 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 R4GMQ9 66 aa10.99□□□□□ -0.65
CHD3-209ENST00000473376 A0A1W2PRD5 423 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 A0A1W2PRF3 423 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 A0A1W2PRM7 423 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 LOC110117498-PIK3R3F6TDL0 507 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 H3BUI4 141 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 FKBP6O75344 327 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 NXPH2O95156 264 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 CHRM2P08172 466 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 PRKACGP22612 351 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 HCCSP53701 268 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 DLX1P56177 255 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 MEF2CQ06413 473 aaPredicted RBP10.98□□□□□ -0.65
CHD3-209ENST00000473376 FLOT2Q14254 428 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 AADACL4Q5VUY2 407 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 TMEM236Q5W0B7 351 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 OR13D1Q8NGV5 346 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 OR14K1Q8NGZ2 314 aa10.98□□□□□ -0.65
CHD3-209ENST00000473376 FAM110DQ8TAY7 271 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms