RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 V9GYS6 101 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 A0A1B0GTI1 187 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 A0A1W2PRD5 423 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 A0A1W2PRF3 423 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 A0A1W2PRM7 423 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 LOC110117498-PIK3R3F6TDL0 507 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 M0R129 80 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 DLGAP1O14490 977 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 MAGEB4O15481 346 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-203ENST00000472892 NOS1APO75052 506 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-203ENST00000472892 EGR3Q06889 387 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 CLVS2Q5SYC1 327 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 ZNF684Q5T5D7 378 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 HCP5Q6MZN7 132 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 BRICD5Q6PL45 260 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 ACP7Q6ZNF0 438 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 Q6ZSV7 163 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 ZNF573Q86YE8 665 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 CD177Q8N6Q3 437 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 OR14K1Q8NGZ2 314 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 MOB1AQ9H8S9 216 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 ELL3Q9HB65 397 aaPredicted RBP12.5□□□□□ -0.41
VTI1A-203ENST00000472892 MRM2Q9UI43 246 aaKnown RBP12.5□□□□□ -0.41
VTI1A-203ENST00000472892 OR52A1Q9UKL2 312 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 SF3B6Q9Y3B4 125 aaKnown RBP12.5□□□□□ -0.41
VTI1A-203ENST00000472892 SNX5Q9Y5X3 404 aa12.5□□□□□ -0.41
VTI1A-203ENST00000472892 PQLC2LA1A4F0 135 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 MEIOCA2RUB1 952 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 BTBD17A6NE02 478 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 RFPL4AA6NLU0 287 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 DHRS7CA6NNS2 312 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 RFPL4AL1F8VTS6 287 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 SYNGR1O43759 233 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 TSPAN9O75954 239 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 PAHP00439 452 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 PGA5P0DJD9 388 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 PRDX2P32119 198 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 SAA4P35542 130 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 HAAOP46952 286 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 BCL2L15Q5TBC7 163 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 ZDHHC13Q8IUH4 622 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 TMEM185AQ8NFB2 350 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 OR5D13Q8NGL4 314 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 OR5R1Q8NH85 324 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 ZNF488Q96MN9 340 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 IL4I1Q96RQ9 567 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 GABARAPL1Q9H0R8 117 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 AP4S1Q9Y587 144 aa12.49□□□□□ -0.41
VTI1A-203ENST00000472892 ZNF670-ZNF695F2Z2N8 137 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 H0YAE9 185 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 J3QT63 122 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 TIMM23O14925 209 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 CCL1P22362 96 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 FASP25445 335 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 TGFBR2P37173 567 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 SMIM21Q3B7S5 101 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 MIDNQ504T8 468 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 DHRS7BQ6IAN0 325 aaPredicted RBP12.48□□□□□ -0.41
VTI1A-203ENST00000472892 ASPHD2Q6ICH7 369 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 PLEKHG7Q6ZR37 379 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 GID4Q8IVV7 300 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 ZNF561Q8N587 486 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 C11orf42Q8N5U0 333 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 BEND2Q8NDZ0 799 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 NRIP2Q9BQI9 281 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 HES4Q9HCC6 221 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 GPR173Q9NS66 373 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 C19orf12Q9NSK7 152 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 ENOPH1Q9UHY7 261 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 GTF2A1LQ9UNN4 478 aa12.48□□□□□ -0.41
VTI1A-203ENST00000472892 A6NIN4 97 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 M0QZ24 198 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 SLC1A7O00341 560 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 MPZP25189 248 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 CAPZA1P52907 286 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 TMEM200BQ69YZ2 307 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 SSX6Q7RTT6 188 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 FAM185AQ8N0U4 392 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 OR51G2Q8NGK0 314 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 C17orf50Q8WW18 174 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 MEGF9Q9H1U4 602 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 WARS2Q9UGM6 360 aaKnown RBP12.47□□□□□ -0.41
VTI1A-203ENST00000472892 SLC22A13Q9Y226 551 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 POLDIP2Q9Y2S7 368 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 CMYA5Q8N3K9 4069 aa12.47□□□□□ -0.41
VTI1A-203ENST00000472892 A0A1W2PPH5 198 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 OR2T7P0C7T2 308 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 HTR1FP30939 366 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 RASSF2P50749 326 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 ERVK11-1P61568 191 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 RPL31P62899 125 aaKnown RBP12.46□□□□□ -0.41
VTI1A-203ENST00000472892 DEFA6Q01524 100 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 ASRGL1Q7L266 308 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 AMIGO2Q86SJ2 522 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 CATSPERDQ86XM0 798 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 MKXQ8IYA7 352 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 OR2T27Q8NH04 317 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 CIB1Q99828 191 aa12.46□□□□□ -0.41
VTI1A-203ENST00000472892 RBM4BQ9BQ04 359 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms