RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 PET100P0DJ07 73 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 ZNF708P17019 499 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 AKR1C4P17516 323 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 CXCL2P19875 107 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 NME2P22392 152 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 VAMP1P23763 118 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 CALCRP30988 508 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 NUP62P37198 522 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-205ENST00000472806 PMELP40967 661 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 LHX2P50458 406 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 SNU13P55769 128 aaKnown RBP6.64□□□□□ -1.35
CCDC171-205ENST00000472806 TMEM50BP56557 158 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 ARPC4P59998 168 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 SORDQ00796 357 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 PSG4Q00888 419 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 PLP2Q04941 152 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 PPP1R1AQ13522 171 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 HLXQ14774 488 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-205ENST00000472806 MICBQ29980 383 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 RSPO1Q2MKA7 263 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-205ENST00000472806 SNAI3Q3KNW1 292 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 PLAC9Q5JTB6 97 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 HES3Q5TGS1 186 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 TMEM42Q69YG0 159 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 OR52W1Q6IF63 320 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 C11orf87Q6NUJ2 197 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 ASCL4Q6XD76 172 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 ZNF546Q86UE3 836 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 GVQW1Q8N7I0 195 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 ZSCAN4Q8NAM6 433 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-205ENST00000472806 TMEM178AQ8NBL3 297 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 OR5AP2Q8NGF4 316 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 ST8SIA4Q92187 359 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 PIGTQ969N2 578 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 Q96M66 194 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 ALKBH3Q96Q83 286 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-205ENST00000472806 VRK1Q99986 396 aaPredicted RBP6.64□□□□□ -1.35
CCDC171-205ENST00000472806 SOX7Q9BT81 388 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 C1QTNF5Q9BXJ0 243 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 TTTY12Q9BZ98 90 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 WNT5BQ9H1J7 359 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 BCO1Q9HAY6 547 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 RAB18Q9NP72 206 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 ACKR4Q9NPB9 350 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 GPR173Q9NS66 373 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 MED9Q9NWA0 146 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 PFDN2Q9UHV9 154 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 GPR132Q9UNW8 380 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 C14orf166Q9Y224 244 aaKnown RBP6.64□□□□□ -1.35
CCDC171-205ENST00000472806 MEMO1Q9Y316 297 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 KIAA1549Q9HCM3 1950 aa6.64□□□□□ -1.35
CCDC171-205ENST00000472806 hCG_38984A0A1B0GV85 526 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM230AA0A1W2PPH8 454 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 PINLYPA6NC86 204 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A10PA6NDY2 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A18PA6NE21 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A16PA6NEW6 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A20PA6NIJ5 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A8PA6NJQ4 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A7PA6NKC0 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FOXI3A8MTJ6 420 aaPredicted RBP6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A22PA8MWA6 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A12PA8MX19 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A5PA8MXJ8 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A23PA8MXZ1 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 LEUTXA8MZ59 168 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 MASP2O00187 686 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 HTR3BO95264 441 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 DBHP09172 617 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 MMP7P09237 267 aaPredicted RBP6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A15PP0C7V4 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A13PP0C7W8 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A14PP0C7W9 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FAM90A24PP0C7X0 464 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 FOSL1P15407 271 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 SDHBP21912 280 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 MEOX1P50221 254 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 CLDN18P56856 261 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 SLC10A1Q14973 349 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 OR8B8Q15620 311 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 NHLRC3Q5JS37 347 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 DCAF12L2Q5VW00 463 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 PLCXD3Q63HM9 321 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 DHRS13Q6UX07 377 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 ACOT7LQ6ZUV0 252 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 SDK1Q7Z5N4 2213 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 GLRX5Q86SX6 157 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 COMMD7Q86VX2 200 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 CCDC28AQ8IWP9 274 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 OSR2Q8N2R0 312 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 KCNRGQ8N5I3 272 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 TMEM251Q8N6I4 163 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 INO80EQ8NBZ0 244 aaPredicted RBP6.63□□□□□ -1.35
CCDC171-205ENST00000472806 OR5D18Q8NGL1 313 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 AKR7LQ8NHP1 331 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 MARCH1Q8TCQ1 289 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 NPRL2Q8WTW4 380 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 ABHD3Q8WU67 409 aa6.63□□□□□ -1.35
CCDC171-205ENST00000472806 SPSB4Q96A44 273 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms