RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 RAB23Q9ULC3 237 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 CHTOPQ9Y3Y2 248 aaKnown RBP2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 TSPOAP1O95153 1857 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 CLDN34H7C241 214 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 KDELR3O43731 214 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 PFN1P07737 140 aaKnown RBP2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 OR4Q2P0C623 313 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 CPN2P22792 545 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 HLA-DMAP28067 261 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 ARR3P36575 388 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 RGS6P49758 472 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 FAM53BQ14153 422 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 NDUFAF6Q330K2 333 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 CDNFQ49AH0 187 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 ZNF678Q5SXM1 525 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 TMEM136Q6ZRR5 245 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 MITD1Q8WV92 249 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 DERL3Q96Q80 235 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 C20orf144Q9BQM9 153 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 TMED9Q9BVK6 235 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 MRPL20Q9BYC9 149 aaKnown RBP2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 TM6SF2Q9BZW4 377 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 SLC7A11Q9UPY5 501 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 V9GYY9 64 aa2.49□□□□□ -2.01
PRPF40A-208ENST00000472760 ELP1O95163 1332 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 ANKRD20A5PA0PJZ0 165 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 GATCO43716 136 aaKnown RBP2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 GMDSO60547 372 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 ALOX12BO75342 701 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 NRASP01111 189 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 HRASP01112 189 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 KRASP01116 189 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 IGHV1-46P01743 117 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 IGKV4-1P06312 121 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 HTR2CP28335 458 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 TGM4P49221 684 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 RPL10AP62906 217 aaKnown RBP2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 PMVKQ15126 192 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 HNRNPA1L2Q32P51 320 aaKnown RBP2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 FAM131AQ6UXB0 335 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 TRMT10CQ7L0Y3 403 aaKnown RBP2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 ITPRIPQ8IWB1 547 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 LRRC8AQ8IWT6 810 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 OR52K1Q8NGK4 314 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 OR13C9Q8NGT0 318 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 NT5CQ8TCD5 201 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 SHANK2-AS3Q9BTD1 123 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 ANGPTL4Q9BY76 406 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 COA1Q9GZY4 146 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 CHRNA10Q9GZZ6 450 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 SND1-IT1Q9HBX3 110 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 PRO0628Q9UI54 55 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 TFR2Q9UP52 801 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 SLC22A7Q9Y694 548 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 ANKRD12Q6UB98 2062 aa2.48□□□□□ -2.01
PRPF40A-208ENST00000472760 TRAV8-7A0A075B6U6 113 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 IGKV2-24A0A0C4DH68 120 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 PTNP21246 168 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 IL5RAQ01344 420 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 BIKQ13323 160 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 C6orf183Q5T699 404 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 FAM104BQ5XKR9 115 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 ASCC1Q8N9N2 400 aaKnown RBP2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 FAM57AQ8TBR7 257 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 SMIM8Q96KF7 97 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 OR2M4Q96R27 311 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 METTL26Q96S19 204 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 ANKHQ9HCJ1 492 aa2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 BZW2Q9Y6E2 419 aaKnown RBP2.47□□□□□ -2.01
PRPF40A-208ENST00000472760 GPR179Q6PRD1 2367 aa2.46□□□□□ -2.01
PRPF40A-208ENST00000472760 RPRD2Q5VT52 1461 aaKnown RBP2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 VGLL3A8MV65 326 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 RNF113AO15541 343 aaKnown RBP2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 CSTAP01040 98 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 SEC11BP0C7V7 166 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 NUDT2P50583 147 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 TAL2Q16559 108 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 TMEM69Q5SWH9 247 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 SYT6Q5T7P8 510 aaPredicted RBP2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 C16orf87Q6PH81 154 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 CLEC19AQ6UXS0 136 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 FAM231DQ6ZW35 169 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 SETD3Q86TU7 594 aaPredicted RBP2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 FAM58AQ8N1B3 248 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 CA13Q8N1Q1 262 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 UTP23Q9BRU9 249 aaKnown RBP2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 ZNF649Q9BS31 505 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 VCX3AQ9NNX9 186 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 ABCB9Q9NP78 766 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 OR2S2Q9NQN1 319 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 INIPQ9NRY2 104 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 AP3M1Q9Y2T2 418 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 TNIKQ9UKE5 1360 aa2.46□□□□□ -2.02
PRPF40A-208ENST00000472760 BRCA1P38398 1863 aaKnown RBP2.45□□□□□ -2.02
PRPF40A-208ENST00000472760 IGKV3D-11A0A0A0MRZ8 115 aa2.45□□□□□ -2.02
PRPF40A-208ENST00000472760 GSTTP1A0A1W2PQM5 241 aa2.45□□□□□ -2.02
PRPF40A-208ENST00000472760 GOLGA6L4A6NEF3 574 aa2.45□□□□□ -2.02
PRPF40A-208ENST00000472760 TVP23AA6NH52 213 aa2.45□□□□□ -2.02
PRPF40A-208ENST00000472760 C9JQL5 133 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms