RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CFHR2P36980 270 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 FMODQ06828 376 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 FBXL19-AS1Q494R0 122 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 PYDC2Q56P42 97 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 LDLRAD2Q5SZI1 272 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 LIN9Q5TKA1 542 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 ZNF660Q6AZW8 331 aaPredicted RBP2.4□□□□□ -2.03
CLK1-209ENST00000472679 TMCO2Q7Z6W1 182 aaPredicted RBP2.4□□□□□ -2.03
CLK1-209ENST00000472679 ITPRIPQ8IWB1 547 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 OR8K3Q8NH51 312 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 ING5Q8WYH8 240 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 ASF1BQ9NVP2 202 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 TTC41PQ6P2S7 1318 aa2.4□□□□□ -2.03
CLK1-209ENST00000472679 IGHV2OR16-5A0A0B4J2B6 119 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 NDUFS5O43920 106 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 ULK3Q6PHR2 472 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 USP50Q70EL3 339 aaPredicted RBP2.39□□□□□ -2.03
CLK1-209ENST00000472679 OTUD6AQ7L8S5 288 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 FXYD5Q96DB9 178 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 PEBP4Q96S96 227 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 DSN1Q9H410 356 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 DUSP21Q9H596 190 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 PLXNB1O43157 2135 aa2.39□□□□□ -2.03
CLK1-209ENST00000472679 C15orf65H3BRN8 121 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 TPM2P07951 284 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 PSMD4P55036 377 aaKnown RBP2.38□□□□□ -2.03
CLK1-209ENST00000472679 KLF3P57682 345 aaPredicted RBP2.38□□□□□ -2.03
CLK1-209ENST00000472679 TNFRSF9Q07011 255 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 LINC00303Q3SY05 128 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 AMMECR1LQ6DCA0 310 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 SMARCD3Q6STE5 483 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 EPGNQ6UW88 154 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 OR2W3Q7Z3T1 314 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 VTCN1Q7Z7D3 282 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 PRNTQ86SH4 94 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 TCP10LQ8TDR4 215 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 ORAOV1Q8WV07 137 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 INIPQ9NRY2 104 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 TMEM38BQ9NVV0 291 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 TRIOBPQ9H2D6 2365 aa2.38□□□□□ -2.03
CLK1-209ENST00000472679 SBNO1A3KN83 1393 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 SETD1AO15047 1707 aaKnown RBP2.37□□□□□ -2.03
CLK1-209ENST00000472679 NPHP4O75161 1426 aaPredicted RBP2.37□□□□□ -2.03
CLK1-209ENST00000472679 IGKV1OR2-108A0A075B7D4 117 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 PCNX2A6NKB5 2137 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 HLA-GP17693 338 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 TUFMP49411 452 aaKnown RBP2.37□□□□□ -2.03
CLK1-209ENST00000472679 HCCSP53701 268 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 DAOAP59103 153 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 C2orf54Q08AI8 447 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 PDZD11Q5EBL8 140 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 TRMT10CQ7L0Y3 403 aaKnown RBP2.37□□□□□ -2.03
CLK1-209ENST00000472679 LINC00337Q8N6G1 96 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 TFGQ92734 400 aaPredicted RBP2.37□□□□□ -2.03
CLK1-209ENST00000472679 RNF170Q96K19 258 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 BLZF1Q9H2G9 400 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 ARMC7Q9H6L4 198 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 RDH14Q9HBH5 336 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 BAZ1BQ9UIG0 1483 aaKnown RBP2.37□□□□□ -2.03
CLK1-209ENST00000472679 ZBED9Q6R2W3 1325 aa2.37□□□□□ -2.03
CLK1-209ENST00000472679 ZNF701M0R085 212 aaPredicted RBP2.36□□□□□ -2.03
CLK1-209ENST00000472679 OR4Q2P0C623 313 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 RALBP11234 206 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 TEAD1P28347 426 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 SPAG1Q07617 926 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 TTC19Q6DKK2 380 aaPredicted RBP2.36□□□□□ -2.03
CLK1-209ENST00000472679 ZNF470Q6ECI4 717 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 ZDHHC22Q8N966 263 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 ACTL9Q8TC94 416 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 TNFRSF14Q92956 283 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 OTUB2Q96DC9 234 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 IGF2BP2-AS1Q96M15 143 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 API5Q9BZZ5 524 aaKnown RBP2.36□□□□□ -2.03
CLK1-209ENST00000472679 CHRNA10Q9GZZ6 450 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 PLEKHG2Q9H7P9 1386 aa2.36□□□□□ -2.03
CLK1-209ENST00000472679 LOC100653049A0A140TA62 436 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 KRT34O76011 436 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 CPSF4O95639 269 aaKnown RBP2.35□□□□□ -2.03
CLK1-209ENST00000472679 CXorf1O96002 111 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 TGFBR2P37173 567 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 MLF1P58340 268 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 PMVKQ15126 192 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 ZNF141Q15928 474 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 TTC32Q5I0X7 151 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 CPTPQ5TA50 214 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 TMEM144Q7Z5S9 345 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 YIPF5Q969M3 257 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 SPACA5Q96QH8 159 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 C20orf144Q9BQM9 153 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 ABCB9Q9NP78 766 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 DDX18Q9NVP1 670 aaKnown RBP2.35□□□□□ -2.03
CLK1-209ENST00000472679 KLF13Q9Y2Y9 288 aaPredicted RBP2.35□□□□□ -2.03
CLK1-209ENST00000472679 ORC6Q9Y5N6 252 aa2.35□□□□□ -2.03
CLK1-209ENST00000472679 H0YIV9 168 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 H3BQ85 93 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 TRAPPC6AO75865 159 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 DHRS3O75911 302 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 CSKP41240 450 aa2.34□□□□□ -2.03
CLK1-209ENST00000472679 PSMB2P49721 201 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms