RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 NOS1APO75052 506 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-211ENST00000472490 RHBDL1O75783 438 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 ALX3O95076 343 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 CYB5AP00167 134 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 GYPAP02724 150 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 MT-ND2P03891 347 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 ACAA1P09110 424 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-211ENST00000472490 EGR1P18146 543 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 ATF1P18846 271 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 MPZP25189 248 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 SLC35A2P78381 396 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 BDH1Q02338 343 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 IL24Q13007 206 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 SMIM21Q3B7S5 101 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 YIF1BQ5BJH7 314 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 RBM48Q5RL73 367 aaKnown RBP11.86□□□□□ -0.51
BRCA1-211ENST00000472490 BTNL3Q6UXE8 466 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 LHFPL2Q6ZUX7 228 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 PARP16Q8N5Y8 322 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 NANOGP1Q8N7R0 232 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 POC1AQ8NBT0 407 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 OR10AC1Q8NH08 325 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 NPRL2Q8WTW4 380 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 ZCCHC4Q9H5U6 513 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 KAAG1Q9UBP8 84 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 ZNF281Q9Y2X9 895 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 TANC2Q9HCD6 1990 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 MAP1AP78559 2803 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-211ENST00000472490 CR1P17927 2039 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 IGHV3OR15-7A0A075B7D8 119 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 GPR37O15354 613 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 PHF1O43189 567 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-211ENST00000472490 AZGP1P25311 298 aaKnown RBP11.85□□□□□ -0.51
BRCA1-211ENST00000472490 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
BRCA1-211ENST00000472490 MTCP1P56278 107 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 GMFBP60983 142 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 SCGB2A2Q13296 93 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 ATPAF1Q5TC12 328 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-211ENST00000472490 DMKNQ6E0U4 476 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-211ENST00000472490 XAF1Q6GPH4 301 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 LYPD2Q6UXB3 125 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 ANGPTL5Q86XS5 388 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 MKXQ8IYA7 352 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 ZNF485Q8NCK3 441 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 THRSPQ92748 146 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 GHSRQ92847 366 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 MED30Q96HR3 178 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 OPALINQ96PE5 141 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 MRI1Q9BV20 369 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 DUSP21Q9H596 190 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 NLKQ9UBE8 527 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 DYSFO75923 2080 aa11.85□□□□□ -0.51
BRCA1-211ENST00000472490 ACANP16112 2415 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 OR2AT4A6NND4 320 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-211ENST00000472490 TNFRSF13BO14836 293 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-211ENST00000472490 RGS10O43665 173 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 NDUFB3O43676 98 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 SULT1B1O43704 296 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 NXPH2O95156 264 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 ECDO95905 644 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-211ENST00000472490 IFNA2P01563 188 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 CD1AP06126 327 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 FAM157CP0CG43 387 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 PGA5P0DJD9 388 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 SRD5A1P18405 259 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 RAB3AP20336 220 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 CRHBPP24387 322 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 SRP14P37108 136 aaKnown RBP11.84□□□□□ -0.51
BRCA1-211ENST00000472490 SEC61A1P61619 476 aaKnown RBP11.84□□□□□ -0.51
BRCA1-211ENST00000472490 PPP3R1P63098 170 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 HOXA4Q00056 320 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-211ENST00000472490 ACSM1Q08AH1 577 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 SPHARQ15513 63 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 LRRC10Q5BKY1 277 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 WDR25Q64LD2 544 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-211ENST00000472490 STUMQ69YW2 141 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 CALHM1Q8IU99 346 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 Q8IYB0 196 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 OR13C9Q8NGT0 318 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 RAB40AQ8WXH6 277 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 TMEM106AQ96A25 262 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 CCDC90BQ9GZT6 254 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 WDR13Q9H1Z4 485 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 C7orf69Q9H7B7 122 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 CKLFQ9UBR5 152 aa11.84□□□□□ -0.51
BRCA1-211ENST00000472490 CHD3Q12873 2000 aaKnown RBP11.84□□□□□ -0.51
BRCA1-211ENST00000472490 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 IGKV1-9A0A0C4DH69 117 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 KIAA1324LA8MWY0 1029 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-211ENST00000472490 DENRO43583 198 aaKnown RBP11.83□□□□□ -0.52
BRCA1-211ENST00000472490 SYNGR1O43759 233 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 ENSAO43768 121 aaKnown RBP11.83□□□□□ -0.52
BRCA1-211ENST00000472490 LALBAP00709 142 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 LIPFP07098 398 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 HCKP08631 526 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 HOXB4P17483 251 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-211ENST00000472490 CELP19835 753 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 EEF1B2P24534 225 aaKnown RBP11.83□□□□□ -0.52
BRCA1-211ENST00000472490 SOX2P48431 317 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms