RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 OXGR1Q96P68 337 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 CIB3Q96Q77 187 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 DDOQ99489 341 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ATF6BQ99941 703 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 SLC39A8Q9C0K1 460 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 GTSF1LQ9H1H1 148 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 ELL3Q9HB65 397 aaPredicted RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 HEBP1Q9NRV9 189 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 MRPS18AQ9NVS2 196 aaKnown RBP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 RBM22Q9NW64 420 aaKnown RBP eCLIP4.48□□□□□ -1.69
COL3A1-205ENST00000470167 BET1LQ9NYM9 111 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 TAS2R8Q9NYW2 309 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 NAT8BQ9UHF3 227 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 PSORS1C1Q9UIG5 152 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 KCNE5Q9UJ90 142 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 OAZ3Q9UMX2 235 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 DHDHQ9UQ10 334 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 LAMTOR2Q9Y2Q5 125 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 RNF115Q9Y4L5 304 aa4.48□□□□□ -1.69
COL3A1-205ENST00000470167 PCNTO95613 3336 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 MYO5AQ9Y4I1 1855 aaKnown RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 CPS1P31327 1500 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 DLC1Q96QB1 1528 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 PHRF1Q9P1Y6 1649 aaKnown RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 ZSWIM8A7E2V4 1837 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 SPAARA0A1B0GVQ0 90 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 SMIM35A0A1B0GVV1 85 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 DHRS12A0PJE2 317 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 LRP5LA4QPB2 252 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 MAP1LC3B2A6NCE7 125 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 RNF222A6NCQ9 220 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 GAGE12HA6NDE8 117 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM8BA6NDV4 472 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 FAM159BA6NKW6 160 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 SLC38A8A6NNN8 435 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF705GA8MUZ8 300 aaPredicted RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 FAM157AC9JC47 383 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 E9PLN8 166 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 G3V2L1 256 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 PLPP3O14495 311 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 SLC16A7O60669 478 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 CNMDO75829 334 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 CD160O95971 181 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 MAS1P04201 325 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 CRYGDP07320 174 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 CELA3BP08861 270 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 SLC35G6P0C7Q6 338 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 IGLC1P0CG04 106 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 PRSS56P0CW18 603 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 OR12D1P0DN82 309 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 PSMB4P28070 264 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 CD1CP29017 333 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 AGTR1P30556 359 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 POLR2HP52434 150 aaKnown RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 DLX6P56179 175 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 LGALS4P56470 323 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 ADORA2A-AS1P86434 159 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 CXCL9Q07325 125 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 MFGE8Q08431 387 aaPredicted RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 LY6DQ14210 128 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 RBM39Q14498 530 aaKnown RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 PCOLCEQ15113 449 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 OR8B8Q15620 311 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM183BQ1AE95 376 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 HLA-BQ31612 363 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 GFI1BQ5VTD9 330 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 FAM69BQ5VUD6 431 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 PLAG1Q6DJT9 500 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 ZFAND6Q6FIF0 208 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 C8orf82Q6P1X6 216 aaPredicted RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 FAM180AQ6UWF9 173 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 GLDNQ6ZMI3 551 aaPredicted RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 H2AFVQ71UI9 128 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 CBLL1Q75N03 491 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF605Q86T29 641 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF761Q86XN6 746 aaPredicted RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 GKN2Q86XP6 184 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 FBXO16Q8IX29 292 aaPredicted RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 Q8N3U1 123 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 LILRA3Q8N6C8 439 aaPredicted RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF555Q8NEP9 628 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 OR5AU1Q8NGC0 362 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 C15orf40Q8WUR7 153 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 DCUN1D4Q92564 292 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 TSLPQ969D9 159 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 RPEQ96AT9 228 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 TSSK2Q96PF2 358 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 DUX3Q96PT4 197 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 TIMP4Q99727 224 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 SLC25A33Q9BSK2 321 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 PECRQ9BY49 303 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 MAP1LC3BQ9GZQ8 125 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 NELFAQ9H3P2 528 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 FNDC4Q9H6D8 234 aaPredicted RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 MOB1AQ9H8S9 216 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 HINT3Q9NQE9 182 aaKnown RBP4.47□□□□□ -1.69
COL3A1-205ENST00000470167 INPP5EQ9NRR6 644 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF586Q9NXT0 402 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 SIGLEC7Q9Y286 467 aa4.47□□□□□ -1.69
COL3A1-205ENST00000470167 DIP2CQ9Y2E4 1556 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms