RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 KISS1Q15726 138 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 ZNF181Q2M3W8 571 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 DDI2Q5TDH0 399 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 SHEQ5VZ18 495 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 C22orf42Q6IC83 251 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 LHFPL2Q6ZUX7 228 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 LYPD6Q86Y78 171 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 ZNF573Q86YE8 665 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 BOLLQ8N9W6 283 aaKnown RBP12.42□□□□□ -0.42
COL9A3-209ENST00000469852 GFI1Q99684 422 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 WDR13Q9H1Z4 485 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 TMEM138Q9NPI0 162 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 TXNL4BQ9NX01 149 aaKnown RBP12.42□□□□□ -0.42
COL9A3-209ENST00000469852 RNF7Q9UBF6 113 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 WIPI2Q9Y4P8 454 aa12.42□□□□□ -0.42
COL9A3-209ENST00000469852 A0A096LNT2 108 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 IGKV1-12A0A0C4DH73 117 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 CLDN25C9JDP6 229 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 F8VVB4 439 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 F8VWA3 439 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 ANGPTL7O43827 346 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 IGKV1D-12P01611 117 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 IGHV2-70P01814 119 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 ALDOBP05062 364 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 CSF3P09919 207 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 OCMP0CE72 109 aaPredicted RBP12.41□□□□□ -0.42
COL9A3-209ENST00000469852 SRMP19623 302 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 CALRP27797 417 aaKnown RBP12.41□□□□□ -0.42
COL9A3-209ENST00000469852 TGFBR1P36897 503 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
COL9A3-209ENST00000469852 POU3F4P49335 361 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 TMEM33P57088 247 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 ZP1P60852 638 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 ZMYND11Q15326 602 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 SLC25A26Q70HW3 274 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 SATL1Q86VE3 508 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 OR11L1Q8NGX0 322 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 THRSPQ92748 146 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 SLAMF9Q96A28 289 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 CHCHD6Q9BRQ6 235 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 PIMREGQ9BSJ6 248 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 PKIBQ9C010 78 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 NARFLQ9H6Q4 476 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 EXOSC4Q9NPD3 245 aaKnown RBP12.41□□□□□ -0.42
COL9A3-209ENST00000469852 MTCH1Q9NZJ7 389 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 CKLFQ9UBR5 152 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 NPTNQ9Y639 398 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 MTORP42345 2549 aa12.41□□□□□ -0.42
COL9A3-209ENST00000469852 CR1P17927 2039 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 IGHV3OR15-7A0A075B7D8 119 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 SRRM5B3KS81 715 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 NDUFS8O00217 210 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 TFF1P04155 84 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 CFHR2P36980 270 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 NR4A2P43354 598 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 OR3A4PP47883 348 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 DSCR9P59020 149 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 BTG1P62324 171 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 IL24Q13007 206 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 PDZK1IP1Q13113 114 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 SFRP4Q6FHJ7 346 aaPredicted RBP12.4□□□□□ -0.42
COL9A3-209ENST00000469852 C1QL2Q7Z5L3 287 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 OR10Z1Q8NGY1 313 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 HPS1Q92902 700 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 CENPOQ9BU64 300 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 FUNDC2Q9BWH2 189 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 NAA50Q9GZZ1 169 aaKnown RBP12.4□□□□□ -0.42
COL9A3-209ENST00000469852 TCF7L1Q9HCS4 588 aa12.4□□□□□ -0.42
COL9A3-209ENST00000469852 FLNAP21333 2647 aaKnown RBP12.4□□□□□ -0.43
COL9A3-209ENST00000469852 IGHV4-61A0A0C4DH41 118 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 LOC100506127A0A0U1RQW1 187 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 LRRC30A6NM36 301 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 RNF223E7ERA6 249 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 IFNL4K9M1U5 179 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 ARL6IP5O75915 188 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 PGA5P0DJD9 388 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 IRF2P14316 349 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 GALP22466 123 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 FGF9P31371 208 aaPredicted RBP12.39□□□□□ -0.43
COL9A3-209ENST00000469852 ZNF93P35789 620 aaPredicted RBP12.39□□□□□ -0.43
COL9A3-209ENST00000469852 NPBWR2P48146 333 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 ERVK11-1P61568 191 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 CIARTQ8N365 385 aaPredicted RBP12.39□□□□□ -0.43
COL9A3-209ENST00000469852 POC1AQ8NBT0 407 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 MAPK1IP1LQ8NDC0 245 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 DEFB108BQ8NET1 73 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 PHYHIPQ92561 330 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 NRIP2Q9BQI9 281 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 TMEM165Q9HC07 324 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 IL36RNQ9UBH0 155 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 SSR3Q9UNL2 185 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 ABCA2Q9BZC7 2435 aa12.39□□□□□ -0.43
COL9A3-209ENST00000469852 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
COL9A3-209ENST00000469852 SMIM30A4D0T7 59 aa12.38□□□□□ -0.43
COL9A3-209ENST00000469852 ISPDA4D126 451 aa12.38□□□□□ -0.43
COL9A3-209ENST00000469852 PPIAL4DF5H284 164 aa12.38□□□□□ -0.43
COL9A3-209ENST00000469852 MAGEB3O15480 346 aa12.38□□□□□ -0.43
COL9A3-209ENST00000469852 NOS1APO75052 506 aaPredicted RBP12.38□□□□□ -0.43
COL9A3-209ENST00000469852 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms