RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 OR52K1Q8NGK4 314 aa2.1□□□□□ -2.07
VPS8-220ENST00000469713 ZFAND1Q8TCF1 268 aa2.1□□□□□ -2.07
VPS8-220ENST00000469713 PHF10Q8WUB8 498 aaKnown RBP2.1□□□□□ -2.07
VPS8-220ENST00000469713 ZNF649Q9BS31 505 aa2.1□□□□□ -2.07
VPS8-220ENST00000469713 LHX5Q9H2C1 402 aa2.1□□□□□ -2.07
VPS8-220ENST00000469713 CFL2Q9Y281 166 aa2.1□□□□□ -2.07
VPS8-220ENST00000469713 ORC6Q9Y5N6 252 aa2.1□□□□□ -2.07
VPS8-220ENST00000469713 SHANK1Q9Y566 2161 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 SIGLEC1Q9BZZ2 1709 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 TRAV8-7A0A075B6U6 113 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 SEC14L6B5MCN3 397 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.09□□□□□ -2.07
VPS8-220ENST00000469713 ALOX12BO75342 701 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 CSTAP01040 98 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 IGKV1D-16P01601 117 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 IGLV7-43P04211 117 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 OR5AL1P0C617 328 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 ATP5J2P56134 94 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 PMVKQ15126 192 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 STK38Q15208 465 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 TAL2Q16559 108 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 FBXL19-AS1Q494R0 122 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 CDNFQ49AH0 187 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 C6orf183Q5T699 404 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 FAM131AQ6UXB0 335 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 RNF10Q8N5U6 811 aaKnown RBP2.09□□□□□ -2.07
VPS8-220ENST00000469713 ASCC1Q8N9N2 400 aaKnown RBP2.09□□□□□ -2.07
VPS8-220ENST00000469713 C1orf64Q8NEQ6 169 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 SLC26A10Q8NG04 563 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 MITD1Q8WV92 249 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 CACNG8Q8WXS5 425 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 YIPF6Q96EC8 236 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 DERL3Q96Q80 235 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 SEC22CQ9BRL7 303 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 MAP1LC3CQ9BXW4 147 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 ANGPTL4Q9BY76 406 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 TM6SF2Q9BZW4 377 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 PORCNQ9H237 461 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 DDIT4Q9NX09 232 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 TFR2Q9UP52 801 aa2.09□□□□□ -2.07
VPS8-220ENST00000469713 ELP1O95163 1332 aa2.09□□□□□ -2.08
VPS8-220ENST00000469713 THADAQ6YHU6 1953 aa2.09□□□□□ -2.08
VPS8-220ENST00000469713 NPHP4O75161 1426 aaPredicted RBP2.08□□□□□ -2.08
VPS8-220ENST00000469713 SEC16AO15027 2179 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 TMEM131Q92545 1883 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 ANKRD20A5PA0PJZ0 165 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 TVP23AA6NH52 213 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 K7EN84 100 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 M0R1B8 84 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 DHRS3O75911 302 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 IGHV1-46P01743 117 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 RHOCP08134 193 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 LIPCP11150 499 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 HLA-GP17693 338 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 PTNP21246 168 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 HTR2CP28335 458 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 TGM4P49221 684 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 RGS6P49758 472 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 CARD18P57730 90 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 RPS11P62280 158 aaKnown RBP eCLIP2.08□□□□□ -2.08
VPS8-220ENST00000469713 IL5RAQ01344 420 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 FLI1Q01543 452 aaPredicted RBP2.08□□□□□ -2.08
VPS8-220ENST00000469713 DYNC1I2Q13409 638 aaKnown RBP2.08□□□□□ -2.08
VPS8-220ENST00000469713 SLC25A25Q6KCM7 469 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 PRNTQ86SH4 94 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 SETD3Q86TU7 594 aaPredicted RBP2.08□□□□□ -2.08
VPS8-220ENST00000469713 CALHM3Q86XJ0 350 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 ITPRIPQ8IWB1 547 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 LRRC8AQ8IWT6 810 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 LINC00337Q8N6G1 96 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 ZNF680Q8NEM1 530 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 OR13C9Q8NGT0 318 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 FAM57AQ8TBR7 257 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 NT5CQ8TCD5 201 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 ORAOV1Q8WV07 137 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 PDCD1LG2Q9BQ51 273 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 UTP23Q9BRU9 249 aaKnown RBP2.08□□□□□ -2.08
VPS8-220ENST00000469713 SHANK2-AS3Q9BTD1 123 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 TMED9Q9BVK6 235 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 COA1Q9GZY4 146 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 ANKHQ9HCJ1 492 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 STX18Q9P2W9 335 aaKnown RBP2.08□□□□□ -2.08
VPS8-220ENST00000469713 RAB23Q9ULC3 237 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 V9GYY9 64 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 TNIKQ9UKE5 1360 aa2.08□□□□□ -2.08
VPS8-220ENST00000469713 AQRO60306 1485 aaKnown RBP eCLIP2.07□□□□□ -2.08
VPS8-220ENST00000469713 OR6C70A6NIJ9 312 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 RFXANKO14593 260 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 RNF113AO15541 343 aaKnown RBP2.07□□□□□ -2.08
VPS8-220ENST00000469713 NRASP01111 189 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 HRASP01112 189 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 KRASP01116 189 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 OR4Q2P0C623 313 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 SEC11BP0C7V7 166 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 P2RY2P41231 377 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 RPL10AP62906 217 aaKnown RBP2.07□□□□□ -2.08
VPS8-220ENST00000469713 ATP5G2Q06055 141 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 FAM104BQ5XKR9 115 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 CLEC19AQ6UXS0 136 aa2.07□□□□□ -2.08
VPS8-220ENST00000469713 FAM58AQ8N1B3 248 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms