RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 MS4A2Q01362 244 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 GINS1Q14691 196 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 KRT77Q7Z794 578 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 DHFR2Q86XF0 187 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 CPOQ8IVL8 374 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 ZNF561Q8N587 486 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 POC1AQ8NBT0 407 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 GIPC3Q8TF64 312 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 WIPF2Q8TF74 440 aaPredicted RBP9.9□□□□□ -0.82
COL5A1-207ENST00000469093 ITFG2Q969R8 447 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 ZNF488Q96MN9 340 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 MMP28Q9H239 520 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 C1orf21Q9H246 121 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 NECAP2Q9NVZ3 263 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 FAM206AQ9NX38 181 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 USE1Q9NZ43 259 aa9.9□□□□□ -0.82
COL5A1-207ENST00000469093 TMEM269A0A1B0GVZ9 245 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 hCG_1809904A0A1W2PP81 198 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 A0A1W2PPE2 198 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 A0A1W2PPH5 198 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 A0A1W2PR64 198 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 A0A1W2PRV1 198 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 PSMD9O00233 223 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 PRODHO43272 600 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 SYNGR1O43759 233 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 NOS1APO75052 506 aaPredicted RBP9.89□□□□□ -0.83
COL5A1-207ENST00000469093 IGLV3-1P01715 115 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 T-ENOLP0DO92 83 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 ATP6V1B1P15313 513 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 CEBPDP49716 269 aaPredicted RBP9.89□□□□□ -0.83
COL5A1-207ENST00000469093 RIPPLY1Q0D2K3 151 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 TRIM25Q14258 630 aaKnown RBP9.89□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF273Q14593 569 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 FAM98BQ52LJ0 330 aaKnown RBP9.89□□□□□ -0.83
COL5A1-207ENST00000469093 LCN8Q6JVE9 175 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 DEGS2Q6QHC5 323 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 NDUFA11Q86Y39 141 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 CALHM1Q8IU99 346 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 BBS1Q8NFJ9 593 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 OR4S1Q8NGB4 309 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 SGCDQ92629 289 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 R3HDM4Q96D70 268 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 TEAD3Q99594 435 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 CITED2Q99967 270 aaPredicted RBP9.89□□□□□ -0.83
COL5A1-207ENST00000469093 CDCA4Q9BXL8 241 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 WNT10AQ9GZT5 417 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 GPR84Q9NQS5 396 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 TCF19Q9Y242 345 aa9.89□□□□□ -0.83
COL5A1-207ENST00000469093 A6NDX4 124 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 ARRDC5A6NEK1 342 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 SLC1A7O00341 560 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 GSC2O15499 205 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 NRASP01111 189 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 TK1P04183 234 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 HMGN1P05114 100 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 PGA5P0DJD9 388 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 FAHP16930 419 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 SLC2A5P22732 501 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 HAAOP46952 286 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 DLX6P56179 175 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 CDK5Q00535 292 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 GK3PQ14409 553 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 SMIM21Q3B7S5 101 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 PLA1AQ53H76 456 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 SLC35D3Q5M8T2 416 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 LDLRAD2Q5SZI1 272 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 PLCXD3Q63HM9 321 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF782Q6ZMW2 699 aaPredicted RBP9.88□□□□□ -0.83
COL5A1-207ENST00000469093 Q6ZS46 218 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 TMEM179BQ7Z7N9 219 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 OR4F17Q8NGA8 305 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 OR51E1Q8TCB6 317 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 MALSU1Q96EH3 234 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 OR4F4Q96R69 305 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 NRIP2Q9BQI9 281 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 THTPAQ9BU02 230 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 CHID1Q9BWS9 393 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 MROQ9BYG7 248 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 YIPF3Q9GZM5 350 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 PBOV1Q9GZY1 135 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 AURKAIP1Q9NWT8 199 aaPredicted RBP9.88□□□□□ -0.83
COL5A1-207ENST00000469093 LAMP5Q9UJQ1 280 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 PIGLQ9Y2B2 252 aa9.88□□□□□ -0.83
COL5A1-207ENST00000469093 PRR32B1ATL7 298 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 DNAJC8O75937 253 aaPredicted RBP9.87□□□□□ -0.83
COL5A1-207ENST00000469093 RPS7P62081 194 aaKnown RBP9.87□□□□□ -0.83
COL5A1-207ENST00000469093 BLCAPP62952 87 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 ROM1Q03395 351 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 CNN3Q15417 329 aaKnown RBP9.87□□□□□ -0.83
COL5A1-207ENST00000469093 SSX2Q16385 188 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF684Q5T5D7 378 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 ZBTB37Q5TC79 503 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 KCTD18Q6PI47 426 aaPredicted RBP9.87□□□□□ -0.83
COL5A1-207ENST00000469093 COMMD2Q86X83 199 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 TMEM219Q86XT9 240 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 ZNF573Q86YE8 665 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 WFDC9Q8NEX5 89 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 OR11H6Q8NGC7 330 aa9.87□□□□□ -0.83
COL5A1-207ENST00000469093 PHF21AQ96BD5 680 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms