RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SLC25A47Q6Q0C1 308 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 ZNF621Q6ZSS3 439 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 FGFRL1Q8N441 504 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 CCDC63Q8NA47 563 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 PCYOX1LQ8NBM8 494 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 OR51D1Q8NGF3 324 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 OR4X2Q8NGF9 303 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 BBS10Q8TAM1 723 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 PIFOQ8TCI5 191 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 AENQ8WTP8 325 aaKnown RBP3.26□□□□□ -1.89
SSR3-204ENST00000467733 MYDGFQ969H8 173 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 RASD2Q96D21 266 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 TMEM68Q96MH6 324 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 ZIM3Q96PE6 472 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 FMO2Q99518 471 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 ALG12Q9BV10 488 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 TSPYL1Q9H0U9 437 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 TMEM27Q9HBJ8 222 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 BCL2L10Q9HD36 194 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 PTTG3PQ9NZH4 202 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 ATPIF1Q9UII2 106 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 ZNF229Q9UJW7 825 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 TCF19Q9Y242 345 aa3.26□□□□□ -1.89
SSR3-204ENST00000467733 NOP16Q9Y3C1 178 aaKnown RBP3.26□□□□□ -1.89
SSR3-204ENST00000467733 A0A1B0GW55 424 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 A6NDX4 124 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 OR6C6A6NF89 314 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 PRAC2D3DTV9 90 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 POLR3GO15318 223 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 CHP2O43745 196 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 FMO6PO60774 539 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 HLA-DPB1P04440 258 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 HIST1H2ABP04908 130 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 SERPINE1P05121 402 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 SPARCP09486 303 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 DUX4L2P0CJ85 424 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 DUX4L3P0CJ86 424 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 DUX4L4P0CJ87 422 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 DUX4L5P0CJ88 424 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 DUX4L6P0CJ89 424 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 DUX4L7P0CJ90 424 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 UMPSP11172 480 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 ZNF182P17025 639 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 PAX6P26367 422 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 GUCA1AP43080 201 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 GNG11P61952 73 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 RPL18Q07020 188 aaKnown RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 BEND6Q5SZJ8 279 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 ARMC4Q5T2S8 1044 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 HHATQ5VTY9 493 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 TEX36Q5VZQ5 186 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 C8orf74Q6P047 294 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 C1orf94Q6P1W5 598 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 ZNF613Q6PF04 617 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 DUX4L9Q6RFH8 374 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 PQLC2Q6ZP29 291 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 HIST3H2AQ7L7L0 130 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 SLC36A1Q7Z2H8 476 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 KRT77Q7Z794 578 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 HAPLN4Q86UW8 402 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 RANBP3LQ86VV4 465 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 TMEM219Q86XT9 240 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 SBSPONQ8IVN8 264 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 SLC30A8Q8IWU4 369 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 RNF113BQ8IZP6 322 aaKnown RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 C10orf111Q8N326 155 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 CSNK2A3Q8NEV1 391 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 OR5L1Q8NGL2 311 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 OR5D13Q8NGL4 314 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 FNDC8Q8TC99 324 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 RPS4Y2Q8TD47 263 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 ACOT11Q8WXI4 607 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 SLC7A6Q92536 515 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 HDAC2Q92769 488 aaKnown RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 HIST1H2ACQ93077 130 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 APOBEC3DQ96AK3 386 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 OR52E6Q96RD3 313 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 ZNF649Q9BS31 505 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 ADAT1Q9BUB4 502 aaKnown RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 HCAR1Q9BXC0 346 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 RMND5AQ9H871 391 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 EDA2RQ9HAV5 297 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 POLE4Q9NR33 117 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 PCDHB16Q9NRJ7 776 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 INIPQ9NRY2 104 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 TMEM100Q9NV29 134 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 DUX4Q9UBX2 424 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 PITPNC1Q9UKF7 332 aa3.25□□□□□ -1.89
SSR3-204ENST00000467733 PRPF19Q9UMS4 504 aaKnown RBP3.25□□□□□ -1.89
SSR3-204ENST00000467733 DNAH6Q9C0G6 4158 aa3.24□□□□□ -1.89
SSR3-204ENST00000467733 IGHV3OR15-7A0A075B7D8 119 aa3.24□□□□□ -1.89
SSR3-204ENST00000467733 A0A1W2PPM1 405 aa3.24□□□□□ -1.89
SSR3-204ENST00000467733 hCG_1807616A0A1W2PRN6 198 aa3.24□□□□□ -1.89
SSR3-204ENST00000467733 PRORSD1PA6NEY8 169 aa3.24□□□□□ -1.89
SSR3-204ENST00000467733 C5orf58C9J3I9 102 aa3.24□□□□□ -1.89
SSR3-204ENST00000467733 BLOC1S5-TXNDC5H3BN57 136 aa3.24□□□□□ -1.89
SSR3-204ENST00000467733 KPNA4O00629 521 aaPredicted RBP3.24□□□□□ -1.89
SSR3-204ENST00000467733 COPEO14579 308 aa3.24□□□□□ -1.89
SSR3-204ENST00000467733 RFXANKO14593 260 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms