RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 METTL21EPA6NDL7 271 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 E7ESA3 106 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 H0YC42 278 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 AP3B1O00203 1094 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 ABCD4O14678 606 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TAPBPO15533 448 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 LY6HO94772 140 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 AQP8O94778 261 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 GYPCP04921 128 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 CSF3P09919 207 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 RHOXF2BP0C7M4 288 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 C1GALT1C1LP0DN25 315 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 OGNP20774 298 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 IL32P24001 234 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 FGF9P31371 208 aaPredicted RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 DEKP35659 375 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 LEPP41159 167 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 SLC1A2P43004 574 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 FABP6P51161 128 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 DAP3P51398 398 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 EFNA4P52798 201 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 SUCLG1P53597 346 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 HADHBP55084 474 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 AP1S2P56377 157 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 RWDD2BP57060 319 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TPM4P67936 248 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 BASP1P80723 227 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 CHRNB3Q05901 458 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TGM3Q08188 693 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 DAZ2Q13117 558 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 SLAMF1Q13291 335 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 BIKQ13323 160 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 BCL2A1Q16548 175 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 CFAP157Q5JU67 520 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 RAET1LQ5VY80 246 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 ZNF470Q6ECI4 717 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 ADNP2Q6IQ32 1131 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 UNQ9370/PRO34162Q6UXP9 181 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 ST13P4Q8IZP2 240 aaPredicted RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 TMEM123Q8N131 208 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 MUC15Q8N387 334 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 CEP112Q8N8E3 955 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 ACOT4Q8N9L9 421 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 STEAP2Q8NFT2 490 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TTLQ8NG68 377 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 OR5M1Q8NGP8 315 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 OR6K3Q8NGY3 331 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 OR56B4Q8NH76 319 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TRMT10AQ8TBZ6 339 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 ZNF418Q8TF45 676 aaPredicted RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 C7orf33Q8WU49 177 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TCTEX1D2Q8WW35 142 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 PGLYRP4Q96LB8 373 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 CHP1Q99653 195 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 KLHDC3Q9BQ90 382 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 SLC35A5Q9BS91 424 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 NIPSNAP3BQ9BS92 247 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TSGA10Q9BZW7 698 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 NHEJ1Q9H9Q4 299 aaPredicted RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 LYRM4Q9HD34 91 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 DAZ3Q9NR90 486 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 CBLN4Q9NTU7 201 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 NUDT15Q9NV35 164 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TAS2R13Q9NYV9 303 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 CD274Q9NZQ7 290 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 BFARQ9NZS9 450 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 DCDC2Q9UHG0 476 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 PHF11Q9UIL8 331 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 CLEC4AQ9UMR7 237 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 RPH3ALQ9UNE2 315 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 TFR2Q9UP52 801 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 SLC22A14Q9Y267 594 aa2.06□□□□□ -2.08
XRN1-206ENST00000467077 MRPS7Q9Y2R9 242 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 AK6Q9Y3D8 172 aaKnown RBP2.06□□□□□ -2.08
XRN1-206ENST00000467077 RYR3Q15413 4870 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 DPRXA6NFQ7 191 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 E7EQL1 145 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 GOLGA6L19H0YKK7 550 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 H7C417 338 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 NDUFS8O00217 210 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 ARPC3O15145 178 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 MAGEB3O15480 346 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 CXCL13O43927 109 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 GMFGO60234 142 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 OR10H3O60404 316 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 SS18L1O75177 396 aaPredicted RBP2.05□□□□□ -2.08
XRN1-206ENST00000467077 UGT2B11O75310 529 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 REM1O75628 298 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 AIFM1O95831 613 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 CLPSP04118 112 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 TPM1P09493 284 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 PNMTP11086 282 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 PCMT1P22061 227 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 HIST1H1TP22492 207 aaPredicted RBP2.05□□□□□ -2.08
XRN1-206ENST00000467077 LAP3P28838 519 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 PTGDSP41222 190 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 SSR2P43308 183 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 MAGEA1P43355 309 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 PPOXP50336 477 aa2.05□□□□□ -2.08
XRN1-206ENST00000467077 RAP1GDS1P52306 607 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms