RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 PPIAL4FP0DN26 164 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 TIMM50Q3ZCQ8 353 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 TMEM155Q4W5P6 130 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 FAM27D1Q5T7N8 215 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 DDI2Q5TDH0 399 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 TEX36Q5VZQ5 186 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 ANGPTL5Q86XS5 388 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 MKXQ8IYA7 352 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 SAXO1Q8IYX7 474 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 MUC20Q8N307 709 aaPredicted RBP13.44□□□□□ -0.26
GPC1-207ENST00000466624 POC1AQ8NBT0 407 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 OR52N4Q8NGI2 321 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 OR13F1Q8NGS4 319 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 YIPF6Q96EC8 236 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 PPIL3Q9H2H8 161 aaKnown RBP13.44□□□□□ -0.26
GPC1-207ENST00000466624 RASL12Q9NYN1 266 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 SSR3Q9UNL2 185 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 PPIAL4AQ9Y536 164 aa13.44□□□□□ -0.26
GPC1-207ENST00000466624 A0A096LNT2 108 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 LGALS8O00214 317 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 SYNGR1O43759 233 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 CYB5AP00167 134 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 MAS1P04201 325 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 TFAP2AP05549 437 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 ZNF93P35789 620 aaPredicted RBP13.43□□□□□ -0.26
GPC1-207ENST00000466624 MDH2P40926 338 aaKnown RBP13.43□□□□□ -0.26
GPC1-207ENST00000466624 ALDH3B2P48448 385 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 ZP1P60852 638 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 ERVK11-1P61568 191 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 PDZK1IP1Q13113 114 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 GDPGP1Q6ZNW5 385 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 LRRTM1Q86UE6 522 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 LRRC28Q86X40 367 aaPredicted RBP13.43□□□□□ -0.26
GPC1-207ENST00000466624 LYPD6Q86Y78 171 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 ZSCAN4Q8NAM6 433 aaPredicted RBP13.43□□□□□ -0.26
GPC1-207ENST00000466624 C12orf43Q96C57 262 aaKnown RBP13.43□□□□□ -0.26
GPC1-207ENST00000466624 SPACA5Q96QH8 159 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 METTL17Q9H7H0 456 aaPredicted RBP13.43□□□□□ -0.26
GPC1-207ENST00000466624 RHOFQ9HBH0 211 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 SNTG1Q9NSN8 517 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 TXNL4BQ9NX01 149 aaKnown RBP13.43□□□□□ -0.26
GPC1-207ENST00000466624 ITPR3Q14573 2671 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 VPS13CQ709C8 3753 aa13.43□□□□□ -0.26
GPC1-207ENST00000466624 CR1P17927 2039 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 OTOGQ6ZRI0 2925 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 TRAV1-2A0A0B4J238 106 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 OOEPA6NGQ2 149 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.42□□□□□ -0.26
GPC1-207ENST00000466624 CD37P11049 281 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 MUC1P15941 1255 aaPredicted RBP13.42□□□□□ -0.26
GPC1-207ENST00000466624 EGR1P18146 543 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 CPT2P23786 658 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 GADD45AP24522 165 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
GPC1-207ENST00000466624 POU3F4P49335 361 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 LOXL1Q08397 574 aaPredicted RBP13.42□□□□□ -0.26
GPC1-207ENST00000466624 HNRNPA0Q13151 305 aaKnown RBP13.42□□□□□ -0.26
GPC1-207ENST00000466624 ZMYND11Q15326 602 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 KCNJ8Q15842 424 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 ZNF404Q494X3 552 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 SLC25A26Q70HW3 274 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 FAM90A1Q86YD7 464 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 Q8IYB0 196 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 PNLDC1Q8NA58 520 aaKnown RBP13.42□□□□□ -0.26
GPC1-207ENST00000466624 PXT1Q8NFP0 134 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 FOXRED1Q96CU9 486 aaPredicted RBP13.42□□□□□ -0.26
GPC1-207ENST00000466624 CEP19Q96LK0 163 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 GPER1Q99527 375 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 NRIP2Q9BQI9 281 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 REG4Q9BYZ8 158 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 OR51E2Q9H255 320 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 TMEM165Q9HC07 324 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 HES4Q9HCC6 221 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 MTCH1Q9NZJ7 389 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 GSTK1Q9Y2Q3 226 aa13.42□□□□□ -0.26
GPC1-207ENST00000466624 YLPM1P49750 1951 aaKnown RBP13.41□□□□□ -0.26
GPC1-207ENST00000466624 TRAV38-1A0A0B4J264 116 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 AKR7A2O43488 359 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 KDM4BO94953 1096 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 ADRA2CP18825 462 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 USF1P22415 310 aaPredicted RBP13.41□□□□□ -0.26
GPC1-207ENST00000466624 GLRA1P23415 457 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 CD80P33681 288 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 AVPI1Q5T686 147 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 GLT8D1Q68CQ7 371 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 C22orf42Q6IC83 251 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 ASCL4Q6XD76 172 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 RNF144BQ7Z419 303 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 SPICQ8N5J4 248 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 RFT1Q96AA3 541 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 UQCC2Q9BRT2 126 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 EXOSC4Q9NPD3 245 aaKnown RBP13.41□□□□□ -0.26
GPC1-207ENST00000466624 SCOCQ9UIL1 159 aa13.41□□□□□ -0.26
GPC1-207ENST00000466624 CREBBPQ92793 2442 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 ISPDA4D126 451 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 TRAPPC2LH3BP13 241 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 SPRY1O43609 319 aaPredicted RBP13.4□□□□□ -0.26
GPC1-207ENST00000466624 NDUFA2O43678 99 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 PLATP00750 562 aa13.4□□□□□ -0.26
GPC1-207ENST00000466624 MYL9P24844 172 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms