RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ZNF879B4DU55 563 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 M0R1B8 84 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 PSMD11O00231 422 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 TCAPO15273 167 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 NDUFS5O43920 106 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 OR4Q2P0C623 313 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 DEKP35659 375 aaKnown RBP2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 CMC4P56277 68 aaPredicted RBP2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 ADIGQ0VDE8 80 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 DYNC1I2Q13409 638 aaKnown RBP2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 APOBEC3HQ6NTF7 200 aaKnown RBP2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 DEGS2Q6QHC5 323 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 SETD3Q86TU7 594 aaPredicted RBP2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 LYPD1Q8N2G4 141 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 MIR7-3HGQ8N6C7 128 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 MNS1Q8NEH6 495 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 SLC26A10Q8NG04 563 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 OR2M7Q8NG81 312 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 NDNFQ8TB73 568 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 NT5CQ8TCD5 201 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 LGALS14Q8TCE9 139 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 ORAOV1Q8WV07 137 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 GLT1D1Q96MS3 346 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 RILPQ96NA2 401 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 PDCD1LG2Q9BQ51 273 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 TMED9Q9BVK6 235 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 PRORYQ9H606 182 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 AGPAT3Q9NRZ7 376 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 PRO0628Q9UI54 55 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 RAB23Q9ULC3 237 aa2.43□□□□□ -2.02
CDC42BPA-211ENST00000466538 SCN1AP35498 2009 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 TRAV8-7A0A075B6U6 113 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 IGHV3OR16-8A0A075B7F1 116 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZNF98A6NK75 572 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 PRAMEF26H0Y7S4 382 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 LGALS9O00182 355 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 E2F6O75461 281 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 CELP19835 753 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 PAX6P26367 422 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 ANP32AP39687 249 aaKnown RBP2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 GPR4P46093 362 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 DNASE1L1P49184 302 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 DSTNP60981 165 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 LAMTOR4Q0VGL1 99 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 NDUFAF6Q330K2 333 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 KLHL12Q53G59 568 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 LRRC20Q8TCA0 184 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 KLF14Q8TD94 323 aaPredicted RBP2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 CDKL2Q92772 493 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 OR2M4Q96R27 311 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 C20orf144Q9BQM9 153 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 UTP23Q9BRU9 249 aaKnown RBP2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 MARVELD1Q9BSK0 173 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 API5Q9BZZ5 524 aaKnown RBP2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 ING2Q9H160 280 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 STMN3Q9NZ72 180 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 RAB22AQ9UL26 194 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 ORC6Q9Y5N6 252 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 WIF1Q9Y5W5 379 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 GMEB1Q9Y692 573 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 ENPP4Q9Y6X5 453 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 BRWD3Q6RI45 1802 aa2.42□□□□□ -2.02
CDC42BPA-211ENST00000466538 COL4A4P53420 1690 aaPredicted RBP2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 LOC102724200A0A096LPH7 203 aaPredicted RBP2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 LOC100506127A0A0U1RQW1 187 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 SLC5A10A0PJK1 596 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 HSBP1L1C9JCN9 74 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 YKT6O15498 198 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 IGLV3-19P01714 112 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 LIPCP11150 499 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 HLA-GP17693 338 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 HTR2BP41595 481 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 IDH2P48735 452 aaKnown RBP2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 ATP5J2P56134 94 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 GRB2P62993 217 aaKnown RBP2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 Q3ZCU0 254 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 IDNKQ5T6J7 187 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 PRR9Q5T870 116 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 MED27Q6P2C8 311 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 SPATA24Q86W54 205 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 NELFCDQ8IXH7 590 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 STK40Q8N2I9 435 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 TRIML2Q8N7C3 387 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 SUN5Q8TC36 379 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 HGDQ93099 445 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 WDR34Q96EX3 536 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 METTL26Q96S19 204 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 TSGA10Q9BZW7 698 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 C12orf4Q9NQ89 552 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZNF302Q9NR11 478 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 NRBP2Q9NSY0 501 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 ZNHIT6Q9NWK9 470 aaKnown RBP2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 SDHAF2Q9NX18 166 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 HMGXB4Q9UGU5 601 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 TSPOAP1O95153 1857 aa2.41□□□□□ -2.02
CDC42BPA-211ENST00000466538 DOCK8Q8NF50 2099 aa2.4□□□□□ -2.02
CDC42BPA-211ENST00000466538 IGKV1-6A0A0C4DH72 117 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 TVP23AA6NH52 213 aa2.4□□□□□ -2.03
CDC42BPA-211ENST00000466538 CEACAM18A8MTB9 384 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms