RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 CA5BP1Q8WTZ4 195 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 RAB40AQ8WXH6 277 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 SLC25A28Q96A46 364 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 FAM71F1Q96KD3 344 aaPredicted RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 WFIKKN1Q96NZ8 548 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 NUDT16L1Q9BRJ7 211 aaKnown RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 HEATR1Q9H583 2144 aaKnown RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 ZNF442Q9H7R0 627 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 PCDHB16Q9NRJ7 776 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 CYSLTR2Q9NS75 346 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 AURKAIP1Q9NWT8 199 aaPredicted RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 TAS2R4Q9NYW5 299 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 NPAP1Q9NZP6 1156 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 MRPL15Q9P015 296 aaKnown RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 DKK2Q9UBU2 259 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 STEAP1Q9UHE8 339 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 PIGLQ9Y2B2 252 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 CEP295Q9C0D2 2601 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 MAP1BP46821 2468 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 ASPMQ8IZT6 3477 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 A0A0A6YYH2 397 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 A0A1W2PR80 420 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 DPRXA6NFQ7 191 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 GGT3PA6NGU5 568 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 A6NJ64 397 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 OR5B21A6NL26 309 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ANXA2P2A6NMY6 339 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ANKRD30BLA7E2S9 258 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 TMEM14DPA8MWL7 114 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 CLDN25C9JDP6 229 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 CTDSPLO15194 276 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 LMX1BO60663 402 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ZNF780AO75290 641 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 SCGNO76038 276 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 PTBP3O95758 552 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 IGHV3-13P01766 116 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 MAS1P04201 325 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 CCL2P13500 99 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 CCNOP22674 350 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 GNLYP22749 145 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 AZGP1P25311 298 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 HTR2CP28335 458 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 CALCRP30988 508 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 TNFSF8P32971 234 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ZNF93P35789 620 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 NR4A2P43354 598 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 RBP2P50120 134 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 PPP5CP53041 499 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ATP1B3P54709 279 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 OR10A3P58181 314 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ZP1P60852 638 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 RPS23P62266 143 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 COL10A1Q03692 680 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 MZT1Q08AG7 82 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 PSG7Q13046 419 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 GPR176Q14439 515 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ZNF846Q147U1 533 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 KISS1Q15726 138 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 CEACAM21Q3KPI0 293 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 C2orf76Q3KRA6 126 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 NCMAPQ5T1S8 102 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 IDNKQ5T6J7 187 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 DDI2Q5TDH0 399 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 RGS7BPQ6MZT1 257 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 ADAM5Q6NVV9 412 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 BAIAP2L2Q6UXY1 529 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 NCCRP1Q6ZVX7 275 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 RFPL4BQ6ZWI9 263 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 MRPL21Q7Z2W9 205 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 MYPOPQ86VE0 399 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 FJX1Q86VR8 437 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 TMEM200AQ86VY9 491 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 COMMD2Q86X83 199 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 OR8G5Q8NG78 346 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 OR52N4Q8NGI2 321 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 OR51A2Q8NGJ7 313 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 OR2AE1Q8NHA4 323 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 SLC25A40Q8TBP6 338 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 KLF14Q8TD94 323 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 C15orf40Q8WUR7 153 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ITLN2Q8WWU7 325 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 CMBLQ96DG6 245 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 MRPS24Q96EL2 167 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 BBC3Q96PG8 261 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 TMEM204Q9BSN7 226 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 OR2J1Q9GZK6 312 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 WDR12Q9GZL7 423 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 MIXL1Q9H2W2 232 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 ESRP2Q9H6T0 727 aaKnown RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 PPP1R3EQ9H7J1 279 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 PLEKHA1Q9HB21 404 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 SEBOXQ9HB31 216 aaPredicted RBP4.67□□□□□ -1.66
VPS41-211ENST00000466017 HMG20AQ9NP66 347 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 PALMDQ9NP74 551 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 AKIP1Q9NQ31 210 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 PTTG3PQ9NZH4 202 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 IL36GQ9NZH8 169 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 DAPK2Q9UIK4 370 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 SH3BGRL2Q9UJC5 107 aa4.67□□□□□ -1.66
VPS41-211ENST00000466017 PURGQ9UJV8 347 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms