RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PGA5P0DJD9 388 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 PEX2P28328 305 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 RCN1Q15293 331 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 RUSC1-AS1Q66K80 236 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 ACP7Q6ZNF0 438 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 C9orf139Q6ZV77 190 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 ZNF573Q86YE8 665 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 POC1AQ8NBT0 407 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 OR51A4Q8NGJ6 313 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 FAM216AQ8WUB2 273 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 ZFAND2BQ8WV99 257 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 TMIGD2Q96BF3 282 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 ADAT3Q96EY9 351 aaPredicted RBP10.7□□□□□ -0.7
XRN1-203ENST00000463916 Q96MT0 163 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 DNTTIP1Q9H147 329 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 CNTD2Q9H8S5 307 aa10.7□□□□□ -0.7
XRN1-203ENST00000463916 FBN3Q75N90 2809 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 CENPVL3A0A0U1RRI6 287 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 FAM230AA0A1W2PPH8 454 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 SNTNA6NMZ2 147 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 F8VVB4 439 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 F8VWA3 439 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 J3QT63 122 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 SIGLEC5O15389 551 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 IGHA1P01876 353 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 UBCP0CG48 685 aaKnown RBP10.69□□□□□ -0.7
XRN1-203ENST00000463916 GABRA2P47869 451 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 DLX1P56177 255 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 UBA52P62987 128 aaKnown RBP10.69□□□□□ -0.7
XRN1-203ENST00000463916 IL13RA1P78552 427 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 PRB3Q04118 309 aaPredicted RBP10.69□□□□□ -0.7
XRN1-203ENST00000463916 GALEQ14376 348 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 LRRC10Q5BKY1 277 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 CD177Q8N6Q3 437 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 OR52I1Q8NGK6 324 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 NRIP2Q9BQI9 281 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 ADI1Q9BV57 179 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 ALG8Q9BVK2 526 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 CHST5Q9GZS9 411 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 PLEKHA1Q9HB21 404 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 ELL3Q9HB65 397 aaPredicted RBP10.69□□□□□ -0.7
XRN1-203ENST00000463916 ERVK13-1Q9NX77 482 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 PCDHGB1Q9Y5G3 927 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 IGKV1-9A0A0C4DH69 117 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 RFPL4AA6NLU0 287 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 OR4C45A6NMZ5 311 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 E9PI62 339 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 RFPL4AL1F8VTS6 287 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 NOS1APO75052 506 aaPredicted RBP10.69□□□□□ -0.7
XRN1-203ENST00000463916 ISG15P05161 165 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 MPZP25189 248 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 CEBPDP49716 269 aaPredicted RBP10.69□□□□□ -0.7
XRN1-203ENST00000463916 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 METTL11BQ5VVY1 283 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 MED30Q96HR3 178 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 RDH12Q96NR8 316 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 JMJD8Q96S16 334 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 DCTN5Q9BTE1 182 aa10.69□□□□□ -0.7
XRN1-203ENST00000463916 MRPS18AQ9NVS2 196 aaKnown RBP10.69□□□□□ -0.7
XRN1-203ENST00000463916 SLC25A10Q9UBX3 287 aaPredicted RBP10.69□□□□□ -0.7
XRN1-203ENST00000463916 DNAJC9-AS1A6NH13 148 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 TRIM77I1YAP6 450 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 FADS2O95864 444 aaKnown RBP10.68□□□□□ -0.7
XRN1-203ENST00000463916 CCR9P51686 369 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 ERVK11-1P61568 191 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 RAB40BQ12829 278 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 DEFB112Q30KQ8 113 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 ZNF691Q5VV52 312 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 RBMS3Q6XE24 437 aaKnown RBP10.68□□□□□ -0.7
XRN1-203ENST00000463916 PDZD9Q8IXQ8 264 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 Q8N7P7 452 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 ZNF555Q8NEP9 628 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 CNIH3Q8TBE1 160 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 H1FXQ92522 213 aaKnown RBP10.68□□□□□ -0.7
XRN1-203ENST00000463916 LHX4Q969G2 390 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 FGGYQ96C11 551 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 SDSLQ96GA7 329 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 HES4Q9HCC6 221 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 RASL12Q9NYN1 266 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 MTCH1Q9NZJ7 389 aa10.68□□□□□ -0.7
XRN1-203ENST00000463916 NKX6-3A6NJ46 265 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 GPR37O15354 613 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 INMTO95050 263 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 HTR1AP08908 422 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 LIMS3P0CW19 117 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 LIMS4P0CW20 117 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 NDUFB7P17568 137 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 ACTA2P62736 377 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 ACTG2P63267 376 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 BAMBIQ13145 260 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 GPR157Q5UAW9 335 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 TMEM244Q5VVB8 128 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 RNF144BQ7Z419 303 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 TAF15Q92804 592 aaKnown RBP eCLIP10.67□□□□□ -0.7
XRN1-203ENST00000463916 ONECUT1Q9UBC0 465 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 SLC7A11Q9UPY5 501 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 RPL36Q9Y3U8 105 aaKnown RBP10.67□□□□□ -0.7
XRN1-203ENST00000463916 NXPH2O95156 264 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 PRTN3P24158 256 aa10.67□□□□□ -0.7
XRN1-203ENST00000463916 PRDX2P32119 198 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms