RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ZSCAN4Q8NAM6 433 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-204ENST00000461897 TMEM104Q8NE00 496 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 OR9K2Q8NGE7 335 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 OR8B12Q8NGG6 310 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 OR56B1Q8NGI3 324 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 RNF141Q8WVD5 230 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 AQP10Q96PS8 301 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 GHRLQ9UBU3 117 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 NDRG3Q9UGV2 375 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 KLF13Q9Y2Y9 288 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-204ENST00000461897 PRELID3BQ9Y3B1 194 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 LOC100509620A0A075B734 347 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 CA11O75493 328 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 IGLV3-1P01715 115 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 FAM157CP0CG43 387 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 MEOX1P50221 254 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 CARD18P57730 90 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 Q6ZSR3 168 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 DOK3Q7L591 496 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF101Q8IZC7 436 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 TMEM251Q8N6I4 163 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 ZIC4Q8N9L1 334 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 OR2AJ1Q8NGZ0 328 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 OR10D3Q8NH80 312 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 OR2V1Q8NHB1 315 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 DCUN1D4Q92564 292 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 ARL11Q969Q4 196 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 RRNAD1Q96FB5 475 aaKnown RBP10.87□□□□□ -0.67
COL4A6-204ENST00000461897 TMEM59Q9BXS4 323 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 DNAJB11Q9UBS4 358 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 OSGIN2Q9Y236 505 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 FLVCR1Q9Y5Y0 555 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF726A6NNF4 738 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 NPIPA2E9PIF3 369 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 NPIPA3F8WFD2 350 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 SOCS1O15524 211 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 CXCL13O43927 109 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 RAD51DO75771 328 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 MPIG6BO95866 241 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 ADCYAP1P18509 176 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF121P58317 390 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-204ENST00000461897 SUPT4H1P63272 117 aaKnown RBP10.86□□□□□ -0.67
COL4A6-204ENST00000461897 SURF2Q15527 256 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-204ENST00000461897 ABLIM2Q6H8Q1 611 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 CLEC18BQ6UXF7 455 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 IL34Q6ZMJ4 242 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 RNF144BQ7Z419 303 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 RTN4RL2Q86UN3 420 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 TMEM123Q8N131 208 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 FDCSPQ8NFU4 85 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 HAS2Q92819 552 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 RTBDNQ9BSG5 229 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-204ENST00000461897 URM1Q9BTM9 101 aaKnown RBP10.86□□□□□ -0.67
COL4A6-204ENST00000461897 GPR84Q9NQS5 396 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 MMP26Q9NRE1 261 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 ASF1BQ9NVP2 202 aa10.86□□□□□ -0.67
COL4A6-204ENST00000461897 PTPRZ1P23471 2315 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-204ENST00000461897 FIGNL2A6NMB9 653 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF716A6NP11 495 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 LINC01387J3KSC0 135 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ACTL6AO96019 429 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 QDPRP09417 244 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 CD46P15529 392 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 RPS2P15880 293 aaKnown RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ABOP16442 354 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 CDAP32320 146 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 OR3A4PP47883 348 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 LHX2P50458 406 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 GRB2P62993 217 aaKnown RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ARG2P78540 354 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 SGCAQ16586 387 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 PHYHD1Q5SRE7 291 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 DHRS7BQ6IAN0 325 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 UNQ6126/PRO20091Q6UXV3 157 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ABHD12BQ7Z5M8 362 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 PUSL1Q8N0Z8 303 aaKnown RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ZFP62Q8NB50 900 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 OR14K1Q8NGZ2 314 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 SAT2Q96F10 170 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF845Q96IR2 970 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 TSNAXQ99598 290 aaKnown RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 SF3B5Q9BWJ5 86 aaKnown RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF319Q9P2F9 582 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF629Q9UEG4 869 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 C13orf42A0A1B0GVH6 325 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 KLRC4-KLRK1H3BQV0 150 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 SIGLEC5O15389 551 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 PLATP00750 562 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 NAT2P11245 290 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF84P51523 738 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 CCL11P51671 97 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 CLDN18P56856 261 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 TAS2R46P59540 309 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 PLGLB1Q02325 96 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 SCRN3Q0VDG4 424 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 PPA1Q15181 289 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 MST1LQ2TV78 715 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 HFEQ30201 348 aa10.85□□□□□ -0.67
COL4A6-204ENST00000461897 PLEKHN1Q494U1 663 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-204ENST00000461897 AADACL3Q5VUY0 350 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms