RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 RASL12Q9NYN1 266 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 C1RLQ9NZP8 487 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 ZNRD1Q9P1U0 126 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 MRM2Q9UI43 246 aaKnown RBP11.46□□□□□ -0.57
USP4-206ENST00000461553 ZNF222Q9UK12 451 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 OAZ3Q9UMX2 235 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 V9GYS6 101 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 RNASEK-C17orf49H0YIS7 233 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 SLC1A7O00341 560 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 DLGAP1O14490 977 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 NPFFO15130 113 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 MAGEB4O15481 346 aaPredicted RBP11.45□□□□□ -0.58
USP4-206ENST00000461553 GPR137BO60478 399 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 RPP14O95059 124 aaKnown RBP11.45□□□□□ -0.58
USP4-206ENST00000461553 NXPH2O95156 264 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 HTR1FP30939 366 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 IER3P46695 156 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 EFNB1P98172 346 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 PRB3Q04118 309 aaPredicted RBP11.45□□□□□ -0.58
USP4-206ENST00000461553 OLFML2AQ68BL7 652 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 TMEM42Q69YG0 159 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 ACP7Q6ZNF0 438 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 GDPGP1Q6ZNW5 385 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 SSX6Q7RTT6 188 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 FAM220AQ7Z4H9 259 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 Q8N7P7 452 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 ZNRF1Q8ND25 227 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 OR10H4Q8NGA5 316 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 SDSLQ96GA7 329 aa11.45□□□□□ -0.58
USP4-206ENST00000461553 CENPNQ96H22 339 aaPredicted RBP11.45□□□□□ -0.58
USP4-206ENST00000461553 RBM4BQ9BQ04 359 aaKnown RBP11.45□□□□□ -0.58
USP4-206ENST00000461553 METTL8Q9H825 291 aaKnown RBP11.45□□□□□ -0.58
USP4-206ENST00000461553 A0A1W2PPH5 198 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 A0A1W2PRD5 423 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 A0A1W2PRF3 423 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 A0A1W2PRM7 423 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 MEIOCA2RUB1 952 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 ANKRD61A6NGH8 418 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 SAC3D1A6NKF1 404 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 H0YAE9 185 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 SYNGR1O43759 233 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 APOL3O95236 402 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 OR2T7P0C7T2 308 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 PGA5P0DJD9 388 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 CCL1P22362 96 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 ATP6V1E1P36543 226 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 DLX1P56177 255 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 CDC42P60953 191 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 RELBQ01201 579 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 ODF4Q2M2E3 257 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 DHRS7BQ6IAN0 325 aaPredicted RBP11.44□□□□□ -0.58
USP4-206ENST00000461553 BRICD5Q6PL45 260 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 C1orf122Q6ZSJ8 110 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 ASRGL1Q7L266 308 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 ZNF561Q8N587 486 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 OR5D13Q8NGL4 314 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 OR8J1Q8NGP2 316 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 OR14K1Q8NGZ2 314 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 OR2T27Q8NH04 317 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 RFKQ969G6 155 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 ZNF488Q96MN9 340 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 OSBPL10Q9BXB5 764 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 VPREB3Q9UKI3 123 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 MAB21L2Q9Y586 359 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 ORC6Q9Y5N6 252 aa11.44□□□□□ -0.58
USP4-206ENST00000461553 A0A1W2PQL4 384 aaPredicted RBP11.43□□□□□ -0.58
USP4-206ENST00000461553 PQLC2LA1A4F0 135 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 RFPL4AA6NLU0 287 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 RFPL4AL1F8VTS6 287 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 SYT7O43581 403 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 GATBO75879 557 aaKnown RBP11.43□□□□□ -0.58
USP4-206ENST00000461553 SAA4P35542 130 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 UBE2E1P51965 193 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 ACSM1Q08AH1 577 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 TMED1Q13445 227 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 CATSPERDQ86XM0 798 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 TRMT10AQ8TBZ6 339 aaKnown RBP11.43□□□□□ -0.58
USP4-206ENST00000461553 IMPAD1Q9NX62 359 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 SLC7A11Q9UPY5 501 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 SLC22A13Q9Y226 551 aa11.43□□□□□ -0.58
USP4-206ENST00000461553 MEGF8Q7Z7M0 2845 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 A0A1B0GTI1 187 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 A6NIN4 97 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 METTL15A6NJ78 407 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 H3BSH0 61 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 ANGPTL7O43827 346 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 SULT1C4O75897 302 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 MPZP25189 248 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 POLR2IP36954 125 aaKnown RBP11.42□□□□□ -0.58
USP4-206ENST00000461553 RPL31P62899 125 aaKnown RBP11.42□□□□□ -0.58
USP4-206ENST00000461553 TAF9Q16594 264 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 TREML4Q6UXN2 200 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 Q6ZSR3 168 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 BATF2Q8N1L9 274 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 PNKDQ8N490 385 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 CCDC54Q8NEL0 328 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 OR5R1Q8NH85 324 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 PYDC1Q8WXC3 89 aa11.42□□□□□ -0.58
USP4-206ENST00000461553 TNFRSF14Q92956 283 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms