RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 CCNYL1Q8N7R7 359 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 OR2Z1Q8NG97 314 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 IFT81Q8WYA0 676 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 CPNE4Q96A23 557 aaPredicted RBP1.91□□□□□ -2.1
VCL-203ENST00000461383 S100PBPQ96BU1 408 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 SMARCD1Q96GM5 515 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 C18orf15Q96N68 181 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 METTL26Q96S19 204 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 CTRCQ99895 268 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 MRPL20Q9BYC9 149 aaKnown RBP1.91□□□□□ -2.1
VCL-203ENST00000461383 GOLPH3Q9H4A6 298 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 ACOT13Q9NPJ3 140 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 OPN4Q9UHM6 478 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 ANXA10Q9UJ72 324 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 SETD1AO15047 1707 aaKnown RBP1.91□□□□□ -2.1
VCL-203ENST00000461383 SLIT3O75094 1523 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 BRWD3Q6RI45 1802 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 IGLV3-12A0A075B6K2 115 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 LOC102724200A0A096LPH7 203 aaPredicted RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 IGHV6-1A0A0B4J1U7 121 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 CCL15-CCL14A0A0B4J2E2 113 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 SLC5A10A0PJK1 596 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 BTNL10A8MVZ5 291 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 A8MWL6 223 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 NEMFO60524 1076 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 ZNF286BP0CG31 522 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 BTN1A1Q13410 526 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 TOMM34Q15785 309 aaPredicted RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 TNXAQ16473 311 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 PRSS8Q16651 343 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 CCL15Q16663 113 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 C18orf21Q32NC0 220 aaPredicted RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 CLEC19AQ6UXS0 136 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 NEGR1Q7Z3B1 354 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 SETD3Q86TU7 594 aaPredicted RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 ZCCHC24Q8N2G6 241 aaKnown RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 SLC25A29Q8N8R3 303 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 ZNF709Q8N972 641 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 OR8G5Q8NG78 346 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 C22orf15Q8WYQ4 148 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 ESR2Q92731 530 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 SMIM8Q96KF7 97 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 ZNF717Q9BY31 904 aaPredicted RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 API5Q9BZZ5 524 aaKnown RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 NLE1Q9NVX2 485 aaPredicted RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 DNAJC27Q9NZQ0 273 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 RAB22AQ9UL26 194 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 TFR2Q9UP52 801 aa1.9□□□□□ -2.11
VCL-203ENST00000461383 AHDC1Q5TGY3 1603 aaPredicted RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 COL27A1Q8IZC6 1860 aaPredicted RBP1.9□□□□□ -2.11
VCL-203ENST00000461383 VWA8A3KMH1 1905 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 IGLV2-18A0A075B6J9 118 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 GOLGA8QA0A0J9YX86 632 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 A0A1W2PNU3 283 aaPredicted RBP1.89□□□□□ -2.11
VCL-203ENST00000461383 GOLGA8IPA6NC78 632 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 COLCA2A8K830 154 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 hCG_2039718K7EN88 272 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 ZMPSTE24O75844 475 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 RBBP9O75884 186 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 DHRS3O75911 302 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 IGLV2-8P01709 118 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 CDK1P06493 297 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 LCN1P31025 176 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 SLC18A1P54219 525 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 CMC4P56277 68 aaPredicted RBP1.89□□□□□ -2.11
VCL-203ENST00000461383 TSPAN5P62079 268 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 C2orf80Q0P641 193 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 USF2Q15853 346 aaPredicted RBP1.89□□□□□ -2.11
VCL-203ENST00000461383 APOBEC3HQ6NTF7 200 aaKnown RBP1.89□□□□□ -2.11
VCL-203ENST00000461383 DEGS2Q6QHC5 323 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 UNQ9165/PRO28630Q6UXU0 137 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 BBS7Q8IWZ6 715 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 ZNF101Q8IZC7 436 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 RNF10Q8N5U6 811 aaKnown RBP1.89□□□□□ -2.11
VCL-203ENST00000461383 TMEM105Q8N8V8 129 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 DRAXINQ8NBI3 349 aaPredicted RBP1.89□□□□□ -2.11
VCL-203ENST00000461383 OR51Q1Q8NH59 317 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 ORAOV1Q8WV07 137 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 C17orf50Q8WW18 174 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 TMEM239Q8WW34 195 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 TMIGD2Q96BF3 282 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 YIPF6Q96EC8 236 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 RILPQ96NA2 401 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 CATSPER2Q96P56 530 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 C1orf50Q9BV19 199 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 PORCNQ9H237 461 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 ZSCAN16Q9H4T2 348 aaPredicted RBP1.89□□□□□ -2.11
VCL-203ENST00000461383 PRORYQ9H606 182 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 TMBIM4Q9HC24 238 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 TREM1Q9NP99 234 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 SDHAF3Q9NRP4 125 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 RBM22Q9NW64 420 aaKnown RBP eCLIP1.89□□□□□ -2.11
VCL-203ENST00000461383 RMND1Q9NWS8 449 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 DDIT4Q9NX09 232 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 CLEC2DQ9UHP7 191 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 CFAP45Q9UL16 551 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 ACOT9Q9Y305 439 aa1.89□□□□□ -2.11
VCL-203ENST00000461383 ADAMTSL3P82987 1691 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms