RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 RNPEPL1Q9HAU8 725 aa6.76□□□□□ -1.33
ECHDC1-212ENST00000461239 CENPMQ9NSP4 180 aa6.76□□□□□ -1.33
ECHDC1-212ENST00000461239 SMPD3Q9NY59 655 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-212ENST00000461239 F8P00451 2351 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF878C9JN71 531 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 M0R135 149 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 WBP4O75554 376 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 LYNP07948 512 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 GNAO1P09471 354 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 SBK2P0C263 348 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 ANXA7P20073 488 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 PPOXP50336 477 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 PRKXP51817 358 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 CDC42P60953 191 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 RPS23P62266 143 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 ECH1Q13011 328 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 TNK1Q13470 666 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 SMN1Q16637 294 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF684Q5T5D7 378 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 PRSS57Q6UWY2 283 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 LRRN1Q6UXK5 716 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 FBXW12Q6X9E4 464 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 CIARTQ8N365 385 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 PACRGLQ8N7B6 248 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 OR51G2Q8NGK0 314 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 THEM6Q8WUY1 208 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 HAVCR1Q96D42 359 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 CMBLQ96DG6 245 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF799Q96GE5 643 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 HARBI1Q96MB7 349 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 RDH12Q96NR8 316 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF649Q9BS31 505 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 COPS4Q9BT78 406 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 TTTY10Q9BZA0 68 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 PRRG3Q9BZD7 231 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 TPK1Q9H3S4 243 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 ELOVL3Q9HB03 270 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 SLCO1C1Q9NYB5 712 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 PTTG3PQ9NZH4 202 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 TAAR3PQ9P1P4 343 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 EIF3KQ9UBQ5 218 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 WARS2Q9UGM6 360 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 ORC6Q9Y5N6 252 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 GMPPBQ9Y5P6 360 aa6.75□□□□□ -1.33
ECHDC1-212ENST00000461239 A0A096LNT2 108 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 A0A1W2PQL4 384 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 TRIM64A6NGJ6 449 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 TRIM64BA6NI03 449 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 ZSCAN5BA6NJL1 495 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 H0YHG0 523 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 OGG1O15527 345 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 SRSF10O75494 262 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 PNPP00491 289 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 KITLGP21583 273 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 MAGEB1P43366 347 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 CX3CR1P49238 355 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 RGS6P49758 472 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 EFNA4P52798 201 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 NUDT6P53370 316 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 P2RX3P56373 397 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 KLF3P57682 345 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 CXCR4P61073 352 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 ISL1P61371 349 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 SNRPD2P62316 118 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF85Q03923 595 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF92Q03936 586 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 GK2Q14410 553 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF718Q3SXZ3 478 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 GLYATL3Q5SZD4 288 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF691Q5VV52 312 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 OR2T2Q6IF00 324 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 DRAM2Q6UX65 266 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 TGIF2LYQ8IUE0 185 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 GID4Q8IVV7 300 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 SLC35F2Q8IXU6 374 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 ZNF525Q8N782 197 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 OR2AE1Q8NHA4 323 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 APOBEC3DQ96AK3 386 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 LYZL4Q96KX0 146 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 OR8B4Q96RC9 309 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 CNN2Q99439 309 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 APOL4Q9BPW4 351 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 PCGF1Q9BSM1 259 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 CLN6Q9NWW5 311 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 FAM206AQ9NX38 181 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 MRM2Q9UI43 246 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 PURGQ9UJV8 347 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 LRP12Q9Y561 859 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 ANK3Q12955 4377 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 MTORP42345 2549 aa6.74□□□□□ -1.33
ECHDC1-212ENST00000461239 IGHV4-30-2A0A087WSY4 118 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 TMEM272A0A1B0GTI8 110 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 A0A1B0GWJ7 208 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 A0A1W2PPW3 197 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 LYNX1G3V0Z9 82 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 H3BSA7 217 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 M0R233 179 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 SSX4O60224 188 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 NDUFB8O95169 186 aa6.73□□□□□ -1.33
ECHDC1-212ENST00000461239 ATP6V1G2O95670 118 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms