RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 CSAG2Q9Y5P2 127 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 PUS1Q9Y606 427 aaKnown RBP eCLIP2.16□□□□□ -2.06
HPS3-203ENST00000460822 GAKO14976 1311 aa2.16□□□□□ -2.06
HPS3-203ENST00000460822 CITO14578 2027 aa2.15□□□□□ -2.06
HPS3-203ENST00000460822 TDRD15B5MCY1 1934 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 MIA3Q5JRA6 1907 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 A6NDN8 102 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 H0YJX3 145 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 H3BNH8 94 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 PSMD12O00232 456 aaPredicted RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 DFFAO00273 331 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 ITGB1BP1O14713 200 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 RAD51BO15315 384 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 CRTAPO75718 401 aaPredicted RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 TNFSF13O75888 250 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 SULT1C4O75897 302 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 HPRT1P00492 218 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 SNRPAP09012 282 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 OR8U9P0C7N5 309 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 GKN3PP0CG01 181 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 CHTF8P0CG12 524 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 SLC35E2BP0CK96 405 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 RD3LP0DJH9 198 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 COX4I1P13073 169 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 ICAM2P13598 275 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 NELFEP18615 380 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 RAB5AP20339 215 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 USF1P22415 310 aaPredicted RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 S100A1P23297 94 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 GATA2P23769 480 aaPredicted RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 RPL22P35268 128 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 RBMXP38159 391 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 CDKN2BP42772 138 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 MAGEA6P43360 314 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 DNASE1L1P49184 302 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 EIF2B2P49770 351 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 TAS2R60P59551 318 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 RPL31P62899 125 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 BASP1P80723 227 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 FLOT2Q14254 428 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 KIAA0040Q15053 153 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 NSDHLQ15738 373 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 LPAL2Q16609 132 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 CCDC153Q494R4 210 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 TFDP3Q5H9I0 405 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 PAGE3Q5JUK9 113 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 CPTPQ5TA50 214 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 SPOPLQ6IQ16 392 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 SSX6Q7RTT6 188 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 GTSCR1Q86UQ5 136 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 RALGPS2Q86X27 583 aaPredicted RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 CLVS1Q8IUQ0 354 aaPredicted RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 CEND1Q8N111 149 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 OR52E2Q8NGJ4 325 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 OR2L8Q8NGY9 312 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 OR8U1Q8NH10 309 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 NEIL3Q8TAT5 605 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 MRAPQ8TCY5 172 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 FAM222BQ8WU58 562 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 TMEM230Q96A57 120 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 CMTM5Q96DZ9 223 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 RMND5BQ96G75 393 aaPredicted RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 ZNF681Q96N22 645 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 ZFP3Q96NJ6 502 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 DOK1Q99704 481 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 DCUN1D5Q9BTE7 237 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 SRRQ9GZT4 340 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 TPK1Q9H3S4 243 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 FAM96AQ9H5X1 160 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 PLEKHA1Q9HB21 404 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 SIRT7Q9NRC8 400 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 SLC39A1Q9NY26 324 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 VNN3Q9NY84 501 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 PPIL1Q9Y3C6 166 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 LRRC37AA6NMS7 1700 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 LY75O60449 1722 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 LTBP1Q14766 1721 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 DICER1Q9UPY3 1922 aaKnown RBP2.15□□□□□ -2.07
HPS3-203ENST00000460822 RALGAPA1Q6GYQ0 2036 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 ANKRD12Q6UB98 2062 aa2.15□□□□□ -2.07
HPS3-203ENST00000460822 TRAV39A0A0B4J263 110 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 ANKRD20A5PA0PJZ0 165 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 GOLGA8IPA6NC78 632 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 FABP12A6NFH5 140 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 ZFP92A6NM28 416 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 GOLGA8JA6NMD2 632 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 HIDE1A8MVS5 230 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 J3QRK9 145 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 hCG_2039718K7EN88 272 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 AQP9O43315 295 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 EMC8O43402 210 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 SLC16A7O60669 478 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 C6orf47O95873 294 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 HPNP05981 417 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 GP1BAP07359 652 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 GIPP09681 153 aaPredicted RBP2.14□□□□□ -2.07
HPS3-203ENST00000460822 CD1EP15812 388 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 IGFBP3P17936 291 aaPredicted RBP2.14□□□□□ -2.07
HPS3-203ENST00000460822 HRH1P35367 487 aa2.14□□□□□ -2.07
HPS3-203ENST00000460822 MAS1LP35410 378 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms