RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 CDK16Q00536 496 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 VPS26BQ4G0F5 336 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 TP53I3Q53FA7 332 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 DMRTC1Q5HYR2 192 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 PTRHD1Q6GMV3 140 aaKnown RBP2.31□□□□□ -2.04
CCDC93-204ENST00000460781 TMIGD1Q6UXZ0 262 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 COX15Q7KZN9 410 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 STRADAQ7RTN6 431 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 SNX20Q7Z614 316 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 RBM45Q8IUH3 476 aaKnown RBP2.31□□□□□ -2.04
CCDC93-204ENST00000460781 FAM71AQ8IYT1 594 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 FBXO36Q8NEA4 188 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 CATSPER1Q8NEC5 780 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 OR4D6Q8NGJ1 314 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 OR51S1Q8NGJ8 323 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 JOSD2Q8TAC2 188 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 FAM110BQ8TC76 370 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 PHF10Q8WUB8 498 aaKnown RBP2.31□□□□□ -2.04
CCDC93-204ENST00000460781 FAM172AQ8WUF8 416 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 CACNG8Q8WXS5 425 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 PSMF1Q92530 271 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 ZNF799Q96GE5 643 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 IP6K3Q96PC2 410 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 ZNF317Q96PQ6 595 aaPredicted RBP2.31□□□□□ -2.04
CCDC93-204ENST00000460781 LYSMD1Q96S90 227 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 MBOAT4Q96T53 435 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 NIPSNAP3BQ9BS92 247 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 RIOK2Q9BVS4 552 aaKnown RBP2.31□□□□□ -2.04
CCDC93-204ENST00000460781 HDHD2Q9H0R4 259 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 RAB1BQ9H0U4 201 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 ANKRD19PQ9H560 264 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 UGT1A10Q9HAW8 530 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 FOLH1BQ9HBA9 442 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 IL20Q9NYY1 176 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 IL36GQ9NZH8 169 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 PRO0461Q9UI25 63 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 ENPP5Q9UJA9 477 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 KPTNQ9Y664 436 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 ZNF407Q9C0G0 2248 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 NOTCH1P46531 2555 aa2.31□□□□□ -2.04
CCDC93-204ENST00000460781 RAI1Q7Z5J4 1906 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 NBEAL2Q6ZNJ1 2754 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 EPPK1P58107 5090 aaKnown RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 TRAV17A0A0B4J275 112 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 A0A1W2PPE3 182 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 VSTM2BA6NLU5 285 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 IDSB3KWA1 339 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 C9J4A7 227 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 F8VZ95 297 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 SIVA1O15304 175 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 ZNF780AO75290 641 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 ATP5LO75964 103 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 SCELO95171 688 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 OXSR1O95747 527 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 INSP01308 110 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 IGHV3-48P01763 117 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 SERPINE2P07093 398 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 ANXA5P08758 320 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 COX6A1P12074 109 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 NQO2P16083 231 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 ZNF7P17097 686 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 COX5AP20674 150 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 KITLGP21583 273 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 SLC2A5P22732 501 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 FMO3P31513 532 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 HSPA9P38646 679 aaKnown RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 NAA10P41227 235 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 CRATP43155 626 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 RFX3P48380 749 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 SPINT3P49223 89 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 MNAT1P51948 309 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 BIDP55957 195 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 NUP107P57740 925 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 EGFEM1PQ0D2K5 195 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 PNOCQ13519 176 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 MPPED2Q15777 294 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 NRF1Q16656 503 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 DEFB110Q30KQ9 67 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 TIGITQ495A1 244 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 ENPP6Q6UWR7 440 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 NUDCD3Q8IVD9 361 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 RNF10Q8N5U6 811 aaKnown RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 OR11G2Q8NGC1 345 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 OR56B4Q8NH76 319 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 NEIL3Q8TAT5 605 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 CA5BP1Q8WTZ4 195 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 RXFP2Q8WXD0 754 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 TNFRSF14Q92956 283 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 STMN2Q93045 179 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 MRGPRFQ96AM1 343 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 LRRC45Q96CN5 670 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 PEBP4Q96S96 227 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 NRTNQ99748 197 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 TSG101Q99816 390 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 ACTR6Q9GZN1 396 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 OR52A5Q9H2C5 316 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 GOLPH3Q9H4A6 298 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 REEP4Q9H6H4 257 aa2.3□□□□□ -2.04
CCDC93-204ENST00000460781 RANBP3Q9H6Z4 567 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-204ENST00000460781 KIR3DX1Q9H7L2 352 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms