RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PGA3P0DJD8 388 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 C1GALT1C1LP0DN25 315 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 CSRP1P21291 193 aaKnown RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 NPY1RP25929 384 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 LOXP28300 417 aaPredicted RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 BMI1P35226 326 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 RBM34P42696 430 aaKnown RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 SLC1A2P43004 574 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 CLDN18P56856 261 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 RPL23P62829 140 aaKnown RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 CRADDP78560 199 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 RAD51Q06609 339 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 ART3Q13508 389 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 DGCR6Q14129 220 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 SNRNP35Q16560 246 aaKnown RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 RPEL1Q2QD12 228 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 BEX5Q5H9J7 111 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 ADNP2Q6IQ32 1131 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 ZNF880Q6PDB4 577 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 FAM122BQ7Z309 247 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 HORMAD1Q86X24 394 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 MICU2Q8IYU8 434 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 ZNF561Q8N587 486 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 ZNF615Q8N8J6 731 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 NECAP1Q8NC96 275 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 GPR26Q8NDV2 337 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 OR10W1Q8NGF6 305 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 LINC01560Q8TB33 94 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 GLYATL2Q8WU03 294 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 L3HYPDHQ96EM0 354 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 OR10C1Q96KK4 312 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 BTN2A3PQ96KV6 586 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 JSRP1Q96MG2 331 aaPredicted RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 OPALINQ96PE5 141 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 SCRT1Q9BWW7 348 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 FGF23Q9GZV9 251 aaPredicted RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 ZNF442Q9H7R0 627 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 TMEM27Q9HBJ8 222 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 SLC38A10Q9HBR0 1119 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 MRM3Q9HC36 420 aaKnown RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 CD209Q9NNX6 404 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 C8orf17Q9NRJ1 99 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 COMMD3-BMI1R4GMX3 469 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 MYO7AQ13402 2215 aa1.88□□□□□ -2.11
RFC4-211ENST00000460408 USP9YO00507 2555 aaPredicted RBP1.88□□□□□ -2.11
RFC4-211ENST00000460408 COL12A1Q99715 3063 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 DOCK9Q9BZ29 2069 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 SVILO95425 2214 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 CABIN1Q9Y6J0 2220 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 WDFY3Q8IZQ1 3526 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 NF1P21359 2839 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 STAB1Q9NY15 2570 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 IGHV1-69DA0A0B4J2H0 117 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 C5orf63A6NC05 138 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 LRRIQ4A6NIV6 560 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 SLC22A5O76082 557 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 ZNF806P0C7X5 589 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 GABRG2P18507 467 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 CD70P32970 193 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 PFN2P35080 140 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 RFC3P40938 356 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 SERPINB8P50452 374 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 CLDN8P56748 225 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 DEFB103AP81534 67 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 ZNF816Q0VGE8 651 aaPredicted RBP1.87□□□□□ -2.11
RFC4-211ENST00000460408 ZNF266Q14584 549 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 COX19Q49B96 90 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 MPV17L2Q567V2 206 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 RNASE13Q5GAN3 156 aaKnown RBP1.87□□□□□ -2.11
RFC4-211ENST00000460408 ZFP1Q6P2D0 407 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 COPS6Q7L5N1 327 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 SNX20Q7Z614 316 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 MYOCDQ8IZQ8 938 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 OSR2Q8N2R0 312 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 SNX31Q8N9S9 440 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 LRRC75AQ8NAA5 344 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 OR52P1PQ8NH57 321 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 OR51F2Q8NH61 342 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 OR10G6Q8NH81 332 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 LILRB4Q8NHJ6 448 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 AGR3Q8TD06 166 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 GGTLC1Q9BX51 225 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 SLIRPQ9GZT3 109 aaKnown RBP1.87□□□□□ -2.11
RFC4-211ENST00000460408 CAB39Q9Y376 341 aaPredicted RBP1.87□□□□□ -2.11
RFC4-211ENST00000460408 WIF1Q9Y5W5 379 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 ANKHD1Q8IWZ3 2542 aaKnown RBP1.87□□□□□ -2.11
RFC4-211ENST00000460408 TICRRQ7Z2Z1 1910 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 A0A1B0GUL6 1792 aa1.87□□□□□ -2.11
RFC4-211ENST00000460408 AKAP13Q12802 2813 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 JMJD1CQ15652 2540 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 FLNCQ14315 2725 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 PTPRFP10586 1907 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 LOC285556D6RIA3 1793 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 SMIM26A0A096LP01 95 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 IGHV3-72A0A0B4J1Y9 119 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 C7orf66A4D0T2 115 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 GABRR3A8MPY1 467 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 SYCE1LA8MT33 242 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 SUPT3HB4E1H0 165 aa1.86□□□□□ -2.11
RFC4-211ENST00000460408 C5orf67F2Z3F1 127 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms