RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 EGFL6Q8IUX8 553 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 CMTM4Q8IZR5 234 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 FGFRL1Q8N441 504 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 LGALS12Q96DT0 336 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 RDH12Q96NR8 316 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 DCTN5Q9BTE1 182 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 AASSQ9UDR5 926 aa18.99■□□□□ 0.63
PTPN4-208ENST00000460289 IGKV1D-17A0A075B6S4 117 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 FADS2O95864 444 aaKnown RBP18.98■□□□□ 0.63
PTPN4-208ENST00000460289 PGA5P0DJD9 388 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 CAV3P56539 151 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 OR12D2P58182 307 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 DGUOKQ16854 277 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 SMIM21Q3B7S5 101 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 FDX2Q6P4F2 183 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 ACP7Q6ZNF0 438 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 ZNF555Q8NEP9 628 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 OR2G2Q8NGZ5 317 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 GATAD2BQ8WXI9 593 aa18.98■□□□□ 0.63
PTPN4-208ENST00000460289 H1FXQ92522 213 aaKnown RBP18.98■□□□□ 0.63
PTPN4-208ENST00000460289 SMPD3Q9NY59 655 aaPredicted RBP18.98■□□□□ 0.63
PTPN4-208ENST00000460289 CENPVL3A0A0U1RRI6 287 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 LOC107986453A0A1B0GWG9 222 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 DNAJC9-AS1A6NH13 148 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 H3BSH0 61 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 SYNGR1O43759 233 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 DBTP11182 482 aaKnown RBP18.97■□□□□ 0.63
PTPN4-208ENST00000460289 NDUFB7P17568 137 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 MPZP25189 248 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 KIR3DL2P43630 455 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 COMPP49747 757 aaPredicted RBP18.97■□□□□ 0.63
PTPN4-208ENST00000460289 CCR9P51686 369 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 ZNF91Q05481 1191 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 RDH10Q8IZV5 341 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 C8orf46Q8TAG6 207 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 ZDHHC16Q969W1 377 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 RNF166Q96A37 237 aaPredicted RBP18.97■□□□□ 0.63
PTPN4-208ENST00000460289 SLC25A28Q96A46 364 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 SDSLQ96GA7 329 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 PKIBQ9C010 78 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 CHST5Q9GZS9 411 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 FRRS1LQ9P0K9 344 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 ONECUT1Q9UBC0 465 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 ZNF222Q9UK12 451 aa18.97■□□□□ 0.63
PTPN4-208ENST00000460289 RPL36Q9Y3U8 105 aaKnown RBP18.97■□□□□ 0.63
PTPN4-208ENST00000460289 SOX21Q9Y651 276 aaPredicted RBP18.97■□□□□ 0.63
PTPN4-208ENST00000460289 FAM230AA0A1W2PPH8 454 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 CLDN34H7C241 214 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 J3QLW9 94 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 ISG15P05161 165 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 HTR1AP08908 422 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 SELLP14151 372 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 ZNF19P17023 458 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 FUT6P51993 359 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 RAB40BQ12829 278 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 IL24Q13007 206 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 UBE2V2Q15819 145 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 KIR3DL3Q8N743 410 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 PP6455Q8WZ26 134 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 LHX4Q969G2 390 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 NRIP2Q9BQI9 281 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 PRDM13Q9H4Q3 707 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 NOX4Q9NPH5 578 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 INPP5EQ9NRR6 644 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 MAB21L2Q9Y586 359 aa18.96■□□□□ 0.63
PTPN4-208ENST00000460289 IGHV1-69DA0A0B4J2H0 117 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 RFPL4AA6NLU0 287 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 RFPL4AL1F8VTS6 287 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 NXPH2O95156 264 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 IGHV1-69P01742 117 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 TFF1P04155 84 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 GALEQ14376 348 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 CNN3Q15417 329 aaKnown RBP18.95■□□□□ 0.62
PTPN4-208ENST00000460289 DEFB112Q30KQ8 113 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 KLHL22Q53GT1 634 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 VMO1Q7Z5L0 202 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 LHFPL3Q86UP9 236 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 ANGPTL5Q86XS5 388 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 SYS1Q8N2H4 156 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 ZNRF1Q8ND25 227 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 TRMT10AQ8TBZ6 339 aaKnown RBP18.95■□□□□ 0.62
PTPN4-208ENST00000460289 C4orf36Q96KX1 117 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 C1orf147Q96MC9 270 aaPredicted RBP18.95■□□□□ 0.62
PTPN4-208ENST00000460289 ZNF488Q96MN9 340 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 DUX5Q96PT3 197 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 AMBNQ9NP70 447 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 C8orf4Q9NR00 106 aa18.95■□□□□ 0.62
PTPN4-208ENST00000460289 HAX1O00165 279 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 SLC1A7O00341 560 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 RNASE1P07998 156 aaKnown RBP18.94■□□□□ 0.62
PTPN4-208ENST00000460289 PRDX2P32119 198 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 NANOS3P60323 173 aaKnown RBP18.94■□□□□ 0.62
PTPN4-208ENST00000460289 SLC9A3R2Q15599 337 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 C1orf122Q6ZSJ8 110 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 CALHM1Q8IU99 346 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 ZNF561Q8N587 486 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 TMEM185AQ8NFB2 350 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 PELI1Q96FA3 418 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 BORCS8Q96FH0 119 aa18.94■□□□□ 0.62
PTPN4-208ENST00000460289 ALG8Q9BVK2 526 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms