RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 LRRK2Q5S007 2527 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 C5orf49A4QMS7 147 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 OR6C6A6NF89 314 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 OR4C45A6NMZ5 311 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 P2RY10O00398 339 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 PHYHO14832 338 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 OGG1O15527 345 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 PF4P02776 101 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 ANXA2P07355 339 aaKnown RBP8.92□□□□□ -0.98
USP39-210ENST00000459775 CRYGSP22914 178 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 CRYBB2P43320 205 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 UBE2NP61088 152 aaKnown RBP8.92□□□□□ -0.98
USP39-210ENST00000459775 RPS11P62280 158 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP39-210ENST00000459775 P2RY6Q15077 328 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 RAB35Q15286 201 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 Q5PR19 223 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 TMEM211Q6ICI0 200 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 TMEM91Q6ZNR0 172 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 PRSS45Q7RTY3 260 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 MRGPRGQ86SM5 289 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 FAM89BQ8N5H3 189 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 OR2AE1Q8NHA4 323 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 C4orf45Q96LM5 186 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 ACTR6Q9GZN1 396 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 EXOSC4Q9NPD3 245 aaKnown RBP8.92□□□□□ -0.98
USP39-210ENST00000459775 SLC17A5Q9NRA2 495 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 NDUFB11Q9NX14 153 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 SDHAF2Q9NX18 166 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 JKAMPQ9P055 326 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 ERRFI1Q9UJM3 462 aaPredicted RBP8.92□□□□□ -0.98
USP39-210ENST00000459775 OR52A1Q9UKL2 312 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 STRAPQ9Y3F4 350 aaKnown RBP8.92□□□□□ -0.98
USP39-210ENST00000459775 R4GMQ9 66 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 USP9YO00507 2555 aaPredicted RBP8.92□□□□□ -0.98
USP39-210ENST00000459775 A1L4Q6 167 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 NGFP01138 241 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 STOMP27105 288 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 UGT2B10P36537 528 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 SOX2P48431 317 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 PCBD1P61457 104 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 RBX1P62877 108 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 GAGE1Q13065 139 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 TAB1Q15750 504 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 CTF1Q16619 201 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 RPL22L1Q6P5R6 122 aaKnown RBP8.92□□□□□ -0.98
USP39-210ENST00000459775 SYT9Q86SS6 491 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 P2RY8Q86VZ1 359 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 CATSPERDQ86XM0 798 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 ACBD4Q8NC06 268 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 OR52H1Q8NGJ2 320 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 ISOC1Q96CN7 298 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 PBOV1Q9GZY1 135 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 NPAP1Q9NZP6 1156 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 DIDO1Q9BTC0 2240 aaKnown RBP8.92□□□□□ -0.98
USP39-210ENST00000459775 HIVEP3Q5T1R4 2406 aa8.92□□□□□ -0.98
USP39-210ENST00000459775 OR5H1A6NKK0 313 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 M0R135 149 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 PLPP2O43688 288 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 TTRP02766 147 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 S100A8P05109 93 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 ACSM4P0C7M7 580 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 EPXP11678 715 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 ZNF83P51522 516 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 ARF6P62330 175 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 NRN1LQ496H8 165 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 HACD4Q5VWC8 232 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 C22orf42Q6IC83 251 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 RGS7BPQ6MZT1 257 aaPredicted RBP8.91□□□□□ -0.98
USP39-210ENST00000459775 CLEC9AQ6UXN8 241 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 ZNF101Q8IZC7 436 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 OR5T2Q8NGG2 359 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 OR8B12Q8NGG6 310 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 ABHD4Q8TB40 342 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 OR51E1Q8TCB6 317 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 CACNG8Q8WXS5 425 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 ST8SIA2Q92186 375 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 RAB1CQ92928 201 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 SMIM19Q96E16 107 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 ZNF799Q96GE5 643 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 OR14A2Q96R54 314 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 DOK1Q99704 481 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 NKX3-1Q99801 234 aaPredicted RBP8.91□□□□□ -0.98
USP39-210ENST00000459775 PIGMQ9H3S5 423 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 GLS2Q9UI32 602 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 UNC79Q9P2D8 2635 aa8.91□□□□□ -0.98
USP39-210ENST00000459775 SHISA3A0PJX4 238 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 H3BMQ9 156 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 TBX1O43435 398 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 AIREO43918 545 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 UBL3O95164 117 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 LCATP04180 440 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 ZNF14P17017 642 aaPredicted RBP8.9□□□□□ -0.98
USP39-210ENST00000459775 OTX1P32242 354 aaPredicted RBP8.9□□□□□ -0.98
USP39-210ENST00000459775 TGM4P49221 684 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 TPTEP56180 551 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 PSMA6P60900 246 aaKnown RBP8.9□□□□□ -0.98
USP39-210ENST00000459775 ZNF676Q8N7Q3 588 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 OR2D3Q8NGH3 330 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 OR5AK2Q8NH90 309 aa8.9□□□□□ -0.98
USP39-210ENST00000459775 MRGPRDQ8TDS7 321 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms