RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TP53I3Q53FA7 332 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 OGFRL1Q5TC84 451 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-203ENST00000459756 CMTM4Q8IZR5 234 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 KIR3DL3Q8N743 410 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 POC1AQ8NBT0 407 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 ZNF555Q8NEP9 628 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 C8orf46Q8TAG6 207 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 CYGBQ8WWM9 190 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 GATAD2BQ8WXI9 593 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 DUX5Q96PT3 197 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 DCTN5Q9BTE1 182 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 ACOXLQ9NUZ1 547 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 SLC25A10Q9UBX3 287 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-203ENST00000459756 AASSQ9UDR5 926 aa13.3□□□□□ -0.28
COL7A1-203ENST00000459756 IGKV1D-17A0A075B6S4 117 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 IGHV1-69DA0A0B4J2H0 117 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 DAPL1A0PJW8 107 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 A6NIN4 97 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 MPZL2O60487 215 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 NOS1APO75052 506 aaPredicted RBP13.29□□□□□ -0.28
COL7A1-203ENST00000459756 IGHV1-69P01742 117 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 PGA5P0DJD9 388 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 PSG2P11465 335 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 SELLP14151 372 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 GABRA2P47869 451 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 DGUOKQ16854 277 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 DEFB112Q30KQ8 113 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 PRSS35Q8N3Z0 413 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 H1FXQ92522 213 aaKnown RBP13.29□□□□□ -0.28
COL7A1-203ENST00000459756 LHX4Q969G2 390 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 ZDHHC16Q969W1 377 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 SDSLQ96GA7 329 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 NOX4Q9NPH5 578 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 FAM118AQ9NWS6 357 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 ONECUT1Q9UBC0 465 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 ZNF222Q9UK12 451 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 SLC7A11Q9UPY5 501 aa13.29□□□□□ -0.28
COL7A1-203ENST00000459756 LOC100130705A0A1B0GUX0 176 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 MDFIC2A0A1B0GVS7 189 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 CASQ2O14958 399 aaPredicted RBP13.28□□□□□ -0.28
COL7A1-203ENST00000459756 SLC16A6O15403 523 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 SYNGR1O43759 233 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 GATBO75879 557 aaKnown RBP13.28□□□□□ -0.28
COL7A1-203ENST00000459756 TFF1P04155 84 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 HKR1P10072 659 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 NDUFB7P17568 137 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 GABRB1P18505 474 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 MPZP25189 248 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 CFPP27918 469 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 ACP7Q6ZNF0 438 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 VMO1Q7Z5L0 202 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 ACBD7Q8N6N7 88 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 PACRGLQ8N7B6 248 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 C3orf56Q8N813 242 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
COL7A1-203ENST00000459756 C10orf35Q96D05 121 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 MRPL48Q96GC5 212 aaKnown RBP13.28□□□□□ -0.28
COL7A1-203ENST00000459756 Q96MT0 163 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 MYCBPQ99417 103 aaPredicted RBP13.28□□□□□ -0.28
COL7A1-203ENST00000459756 NRIP2Q9BQI9 281 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 PKIBQ9C010 78 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 CHST5Q9GZS9 411 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 VCXQ9H320 206 aa13.28□□□□□ -0.28
COL7A1-203ENST00000459756 EXOGQ9Y2C4 368 aaKnown RBP13.28□□□□□ -0.28
COL7A1-203ENST00000459756 RRP15Q9Y3B9 282 aaKnown RBP13.28□□□□□ -0.28
COL7A1-203ENST00000459756 LOC107986453A0A1B0GWG9 222 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 NXPH2O95156 264 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 ATP6V1G2O95670 118 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 CLIC3O95833 236 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 SERPINA3P01011 423 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 KIR3DL2P43630 455 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 OR12D2P58182 307 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 ACTA2P62736 377 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 ACTG2P63267 376 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 FOXL1Q12952 345 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 AWAT1Q58HT5 328 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 TMEM244Q5VVB8 128 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 FDX2Q6P4F2 183 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 METAP1DQ6UB28 335 aaPredicted RBP13.27□□□□□ -0.29
COL7A1-203ENST00000459756 Q6YL49 198 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 ENTHD1Q8IYW4 607 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 ZNRF1Q8ND25 227 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 OR2G2Q8NGZ5 317 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 RHOXF1Q8NHV9 184 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 NRG4Q8WWG1 115 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 PP6455Q8WZ26 134 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 LGALS12Q96DT0 336 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 ZNF488Q96MN9 340 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 C8orf4Q9NR00 106 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 MAB21L2Q9Y586 359 aa13.27□□□□□ -0.29
COL7A1-203ENST00000459756 TRBV23-1A0A0A0MS06 115 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 FAM230AA0A1W2PPH8 454 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 RFPL4AA6NLU0 287 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 RFPL4AL1F8VTS6 287 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 H3BSH0 61 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 SLC1A7O00341 560 aa13.26□□□□□ -0.29
COL7A1-203ENST00000459756 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
COL7A1-203ENST00000459756 RRP9O43818 475 aaKnown RBP13.26□□□□□ -0.29
COL7A1-203ENST00000459756 ISG15P05161 165 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms