RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 DCAF12Q5T6F0 453 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 GPR157Q5UAW9 335 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM211Q6ICI0 200 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 DHRS11Q6UWP2 260 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 AAED1Q7RTV5 226 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 SAXO1Q8IYX7 474 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 FAM71E2Q8N5Q1 922 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 BPIFCQ8NFQ6 507 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 OR14L1PQ8NHC6 308 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 ADAMTS17Q8TE56 1095 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 RELTQ969Z4 430 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 ABHD14BQ96IU4 210 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 CNTNAP3BQ96NU0 1288 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF385AQ96PM9 386 aaKnown RBP7.73□□□□□ -1.17
HDAC3-202ENST00000459727 SPACA5Q96QH8 159 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 CMSS1Q9BQ75 279 aaKnown RBP7.73□□□□□ -1.17
HDAC3-202ENST00000459727 RNF126Q9BV68 326 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 SEC11CQ9BY50 192 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 CNTNAP3Q9BZ76 1288 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 LINC00470Q9BZP3 86 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 SLC5A7Q9GZV3 580 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 PRDM14Q9GZV8 571 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 PARPBPQ9NWS1 579 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 ABI3Q9P2A4 366 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF629Q9UEG4 869 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-202ENST00000459727 NSG2Q9Y328 171 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 MYO15AQ9UKN7 3530 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 CEP192Q8TEP8 1941 aa7.73□□□□□ -1.17
HDAC3-202ENST00000459727 TRIOO75962 3097 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 A0A0J9YW62 118 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 DUXBA0A1W2PPF3 345 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 OR5H15A6NDH6 313 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 TNFSF11O14788 317 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 SMAD9O15198 467 aaKnown RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 LAMTOR5O43504 91 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 PDCD6O75340 191 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 DEDDO75618 318 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 HTR3BO95264 441 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 NRASP01111 189 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 SERPINA7P05543 415 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF883P0CG24 379 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF728P0DKX0 622 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 OR5H8P0DN80 308 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 TCN2P20062 427 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 IL32P24001 234 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 HTR5AP47898 357 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 F2RL1P55085 397 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 FOXL2P58012 376 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 IL15RAQ13261 267 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 SSPNQ14714 243 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 IAH1Q2TAA2 248 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 ANKRD55Q3KP44 614 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 C10orf91Q5T1B1 145 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 PXDC1Q5TGL8 231 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 LCN10Q6JVE6 187 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 H3F3CQ6NXT2 135 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 RPUSD3Q6P087 351 aaKnown RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 Q6ZS49 121 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 LGI3Q8N145 548 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 OSR2Q8N2R0 312 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 LRRC18Q8N456 261 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 ZIC4Q8N9L1 334 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 KDF1Q8NAX2 398 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 OR1S2Q8NGQ3 325 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 PIGTQ969N2 578 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 SGK3Q96BR1 496 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 ZC3H10Q96K80 434 aaKnown RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 SMIM8Q96KF7 97 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 JSRP1Q96MG2 331 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 GNRHR2Q96P88 292 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 FOXB1Q99853 325 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 SPIN2AQ99865 258 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 SPIN2BQ9BPZ2 258 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF2Q9BSG1 426 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 STRADBQ9C0K7 418 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 WDR13Q9H1Z4 485 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 NAA60Q9H7X0 242 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 TAF9BQ9HBM6 251 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 PARP11Q9NR21 331 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 PURGQ9UJV8 347 aaKnown RBP7.72□□□□□ -1.17
HDAC3-202ENST00000459727 PRELID1Q9Y255 219 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 SPAG17Q6Q759 2223 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 KIF26BQ2KJY2 2108 aa7.72□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF716A6NP11 495 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF850A8MQ14 1090 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 ZNF705EA8MWA4 302 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-202ENST00000459727 H7C2Y5 167 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 LGALS8O00214 317 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 TERTO14746 1132 aaKnown RBP7.71□□□□□ -1.18
HDAC3-202ENST00000459727 CYTIPO60759 359 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 OPN1LWP04000 364 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 LCATP04180 440 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 SFTPBP07988 381 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 FCGR3AP08637 254 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 CTXN2P0C2S0 81 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 GABRR1P24046 479 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 CHATP28329 748 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 S100GP29377 79 aa7.71□□□□□ -1.18
HDAC3-202ENST00000459727 RPL12P30050 165 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms