RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PLCXD3Q63HM9 321 aa17.48■□□□□ 0.39
CPNE1-220ENST00000458038 TMEM200BQ69YZ2 307 aa17.48■□□□□ 0.39
CPNE1-220ENST00000458038 ASB9Q96DX5 294 aa17.48■□□□□ 0.39
CPNE1-220ENST00000458038 FOXJ3Q9UPW0 622 aa17.48■□□□□ 0.39
CPNE1-220ENST00000458038 POLDIP2Q9Y2S7 368 aa17.48■□□□□ 0.39
CPNE1-220ENST00000458038 E2F6O75461 281 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 NRASP01111 189 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 IGLV3-1P01715 115 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 ANXA8P13928 327 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 SLC2A5P22732 501 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 ZNF829Q3KNS6 432 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-220ENST00000458038 ZNF679Q8IYX0 411 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 C11orf42Q8N5U0 333 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 OR2T27Q8NH04 317 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 OR51E1Q8TCB6 317 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 PBOV1Q9GZY1 135 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 C1orf21Q9H246 121 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 GPR84Q9NQS5 396 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 NUFIP1Q9UHK0 495 aaKnown RBP17.47■□□□□ 0.39
CPNE1-220ENST00000458038 PIGLQ9Y2B2 252 aa17.47■□□□□ 0.39
CPNE1-220ENST00000458038 J3QT63 122 aa17.46■□□□□ 0.39
CPNE1-220ENST00000458038 PGA5P0DJD9 388 aa17.46■□□□□ 0.39
CPNE1-220ENST00000458038 CD177Q8N6Q3 437 aa17.46■□□□□ 0.39
CPNE1-220ENST00000458038 OR4S1Q8NGB4 309 aa17.46■□□□□ 0.39
CPNE1-220ENST00000458038 PIFOQ8TCI5 191 aa17.46■□□□□ 0.39
CPNE1-220ENST00000458038 FOXRED1Q96CU9 486 aaPredicted RBP17.46■□□□□ 0.39
CPNE1-220ENST00000458038 TEAD3Q99594 435 aa17.46■□□□□ 0.39
CPNE1-220ENST00000458038 PITPNC1Q9UKF7 332 aa17.46■□□□□ 0.39
CPNE1-220ENST00000458038 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.46■□□□□ 0.39
CPNE1-220ENST00000458038 FAM90A8PA6NJQ4 464 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 DHRS3O75911 302 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 NXPH2O95156 264 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 FAHP16930 419 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 RIDAP52758 137 aaKnown RBP17.45■□□□□ 0.38
CPNE1-220ENST00000458038 ACTR3P61158 418 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 GNGT1P63211 74 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 APOFQ13790 326 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 Q8N2B8 174 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 C11orf44Q8N8P7 122 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 BBS1Q8NFJ9 593 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 MALSU1Q96EH3 234 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 SLC25A19Q9HC21 320 aa17.45■□□□□ 0.38
CPNE1-220ENST00000458038 TBL2Q9Y4P3 447 aaKnown RBP17.45■□□□□ 0.38
CPNE1-220ENST00000458038 AQP12BA6NM10 295 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 DLGAP1O14490 977 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 RBP4P02753 201 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 VSIG10L2P0DP72 767 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 CALB2P22676 271 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 HAAOP46952 286 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 HCCSP53701 268 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 FAM189A2Q15884 450 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 CLVS2Q5SYC1 327 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 TMEM179BQ7Z7N9 219 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 AQP12AQ8IXF9 295 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 ADGRG5Q8IZF4 528 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 DNAJC9Q8WXX5 260 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 OR8B4Q96RC9 309 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 NRIP2Q9BQI9 281 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 MOB1AQ9H8S9 216 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 TAS2R1Q9NYW7 299 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 DSCAML1Q8TD84 2053 aa17.44■□□□□ 0.38
CPNE1-220ENST00000458038 DHRS7CA6NNS2 312 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 FBXO24O75426 580 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 TK1P04183 234 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 BMXP51813 675 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 SNAPC1Q16533 368 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 TMEM42Q69YG0 159 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 OR13D1Q8NGV5 346 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 RPS4Y2Q8TD47 263 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 NKX3-1Q99801 234 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-220ENST00000458038 ABCB10Q9NRK6 738 aa17.43■□□□□ 0.38
CPNE1-220ENST00000458038 C17orf98A8MV24 154 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 PSMD9O00233 223 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 PIN1P1O15428 100 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 CHST1O43916 411 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 COX7A1P24310 79 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 DMRTC1Q5HYR2 192 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 NDUFA11Q86Y39 141 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 OR4F17Q8NGA8 305 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 OR4M1Q8NGD0 313 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 CANT1Q8WVQ1 401 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 OR4F4Q96R69 305 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 MNTQ99583 582 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 PRSS22Q9GZN4 317 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 ZNF702PQ9H963 129 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 HES4Q9HCC6 221 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 SERTAD4Q9NUC0 356 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 DNAJB9Q9UBS3 223 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 IKZF2Q9UKS7 526 aa17.42■□□□□ 0.38
CPNE1-220ENST00000458038 PQLC2LA1A4F0 135 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 K7N7A8 449 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 SYNGR1O43759 233 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 TTRP02766 147 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 CCL3L1P16619 93 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 MPZP25189 248 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 CNN3Q15417 329 aaKnown RBP17.41■□□□□ 0.38
CPNE1-220ENST00000458038 Q6ZPA2 131 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 CCDC124Q96CT7 223 aaKnown RBP17.41■□□□□ 0.38
CPNE1-220ENST00000458038 ZNF488Q96MN9 340 aa17.41■□□□□ 0.38
CPNE1-220ENST00000458038 TVP23BQ9NYZ1 205 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms