RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 FAM110DQ8TAY7 271 aaPredicted RBP12.91□□□□□ -0.34
CHCHD3-204ENST00000457942 PYDC1Q8WXC3 89 aa12.91□□□□□ -0.34
CHCHD3-204ENST00000457942 AQP3Q92482 292 aa12.91□□□□□ -0.34
CHCHD3-204ENST00000457942 PPP1R14AQ96A00 147 aa12.91□□□□□ -0.34
CHCHD3-204ENST00000457942 METTL8Q9H825 291 aaKnown RBP12.91□□□□□ -0.34
CHCHD3-204ENST00000457942 MOB1AQ9H8S9 216 aa12.91□□□□□ -0.34
CHCHD3-204ENST00000457942 VPREB3Q9UKI3 123 aa12.91□□□□□ -0.34
CHCHD3-204ENST00000457942 IGKV1D-17A0A075B6S4 117 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 TRBV23-1A0A0A0MS06 115 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 ANKRD61A6NGH8 418 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 G3V2T6 193 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 TIMM23O14925 209 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 ANGPTL7O43827 346 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 HAAOP46952 286 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 TAF9Q16594 264 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 ZBTB37Q5TC79 503 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 ASPHD2Q6ICH7 369 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 TMEM163Q8TC26 289 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 ITFG2Q969R8 447 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 IL4I1Q96RQ9 567 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 APOL4Q9BPW4 351 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 GPR173Q9NS66 373 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 AP4S1Q9Y587 144 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 R4GMQ9 66 aa12.9□□□□□ -0.34
CHCHD3-204ENST00000457942 SLC1A7O00341 560 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 MAGEB4O15481 346 aaPredicted RBP12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 TTRP02766 147 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 UBE2E1P51965 193 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 ATP6AP1Q15904 470 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 CLVS2Q5SYC1 327 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 NXNL2Q5VZ03 156 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 ACP7Q6ZNF0 438 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 ZNF573Q86YE8 665 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 BATF2Q8N1L9 274 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 OR51G2Q8NGK0 314 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 OR5D13Q8NGL4 314 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 LINC01006Q8NI28 216 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 MNTQ99583 582 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 TBX5Q99593 518 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 PLEKHA1Q9HB21 404 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 ADGRL4Q9HBW9 690 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 RASL12Q9NYN1 266 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 OR14J1Q9UGF5 321 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 ENOPH1Q9UHY7 261 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 POLDIP2Q9Y2S7 368 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 MAB21L2Q9Y586 359 aa12.89□□□□□ -0.35
CHCHD3-204ENST00000457942 A0A1W2PPH5 198 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 A6NIN4 97 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 SAC3D1A6NKF1 404 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 RFPL4AA6NLU0 287 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 RFPL4AL1F8VTS6 287 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 J3QT63 122 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 SYNGR1O43759 233 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 RPP14O95059 124 aaKnown RBP12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 NXPH2O95156 264 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 IGLV3-1P01715 115 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 KRT8P05787 483 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 FASP25445 335 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 ODF4Q2M2E3 257 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 SLX4IPQ5VYV7 408 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 C1orf122Q6ZSJ8 110 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 ZDHHC13Q8IUH4 622 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 YIPF7Q8N8F6 280 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 POC1AQ8NBT0 407 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 OR5R1Q8NH85 324 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 TCF7L1Q9HCS4 588 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 CLN6Q9NWW5 311 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 SF3B6Q9Y3B4 125 aaKnown RBP12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 SNX5Q9Y5X3 404 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 RYR3Q15413 4870 aa12.88□□□□□ -0.35
CHCHD3-204ENST00000457942 ZAR1LA6NP61 321 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 H3BSH0 61 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 EPHA2P29317 976 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 CEBPDP49716 269 aaPredicted RBP12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 EGR3Q06889 387 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 ACSM1Q08AH1 577 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 Q6ZSV7 163 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 ELMOD2Q8IZ81 293 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 ZNF561Q8N587 486 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 TNFRSF14Q92956 283 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 SDSLQ96GA7 329 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 PPA2Q9H2U2 334 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 C19orf12Q9NSK7 152 aa12.87□□□□□ -0.35
CHCHD3-204ENST00000457942 H3BUX3 64 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 DLGAP1O14490 977 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 SRSF10O75494 262 aaKnown RBP12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 PGA5P0DJD9 388 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 FCGR1AP12314 374 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 COX7A1P24310 79 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 PRDX2P32119 198 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 ATP6V1E1P36543 226 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 TGFBR2P37173 567 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 RPL31P62899 125 aaKnown RBP12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 FBLN7Q53RD9 439 aa12.86□□□□□ -0.35
CHCHD3-204ENST00000457942 AADACL4Q5VUY2 407 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms