RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 SOCS7O14512 581 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TOX3O15405 576 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 MOSPD3O75425 235 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CBR3O75828 277 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 DANCRP0C864 163 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 PMELP40967 661 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 P2RY4P51582 365 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ADPRHP54922 357 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ERV3-1Q14264 604 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 KCNAB1Q14722 419 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 SHHQ15465 462 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ZNF750Q32MQ0 723 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 RFLNAQ6ZTI6 216 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 SLC36A1Q7Z2H8 476 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CDC20BQ86Y33 519 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 LIPHQ8WWY8 451 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 FAM122AQ96E09 287 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 SHDQ96IW2 340 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 SMIM8Q96KF7 97 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 GAS2L1Q99501 681 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TMEM147Q9BVK8 224 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 MTCH1Q9NZJ7 389 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 PIPOXQ9P0Z9 390 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CLCF1Q9UBD9 225 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 MRM2Q9UI43 246 aaKnown RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 MBD1Q9UIS9 605 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 MRPS17Q9Y2R5 130 aaKnown RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 INSL6Q9Y581 213 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 C3orf85A0A1B0GTC6 90 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TRDCB7Z8K6 153 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 FGF16O43320 207 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ZNF253O75346 499 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 PRKRAO75569 313 aaKnown RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TRAPPC6AO75865 159 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TRGC1P0CF51 173 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CD79AP11912 226 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 FUT3P21217 361 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 VDAC1P21796 283 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 PNLIPRP2P54317 469 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 YPEL5P62699 121 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 EWSR1Q01844 656 aaKnown RBP eCLIP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 HIKESHIQ53FT3 197 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ATRAIDQ6UW56 229 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 OSR2Q8N2R0 312 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 PMCHL2Q9BQD1 86 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 PAM16Q9Y3D7 125 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TRBV9A0A0B4J1U6 114 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TRBV5-5A0A0J9YX44 114 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 FAM24AA6NFZ4 105 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 GPR37O15354 613 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CDC14BO60729 498 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 PRAMEF4O60810 478 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ICOSLGO75144 302 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TUSC2O75896 110 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ZFAND5O76080 213 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 OPN1LWP04000 364 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 MELTFP08582 738 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 FHITP49789 147 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 RAB7AP51149 207 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 SLC38A11Q08AI6 406 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CCL14Q16627 93 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 FFAR4Q5NUL3 377 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 HOGA1Q86XE5 327 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 BCORP1Q8N888 145 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CPT1CQ8TCG5 803 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ROBO4Q8WZ75 1007 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 APH1AQ96BI3 265 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 FBXO17Q96EF6 278 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 GALNT14Q96FL9 552 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ADGRG7Q96K78 797 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TOX2Q96NM4 488 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 RNF208Q9H0X6 261 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 MMP25Q9NPA2 562 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CDC42EP3Q9UKI2 254 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 VSIG4Q9Y279 399 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ABCA3Q99758 1704 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CTXND1A0A1B0GTU2 59 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 TCRBV21S2A2A0A5A6 115 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 PRSS38A1L453 326 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 OTOL1A6NHN0 477 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 KIAA1324LA8MWY0 1029 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 F11P03951 625 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 P04436 131 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 SLC25A6P12236 298 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 SLC37A1P57057 533 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 MARCH3Q86UD3 253 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 ZNF683Q8IZ20 524 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 C10orf111Q8N326 155 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 GTF3AQ92664 365 aaKnown RBP4.47□□□□□ -1.69
PCDH9-203ENST00000456367 DNAJA3Q96EY1 480 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 REG4Q9BYZ8 158 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 FOXJ2Q9P0K8 574 aa4.47□□□□□ -1.69
PCDH9-203ENST00000456367 CDC42EP2O14613 210 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 EFSO43281 561 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 OR5G3P0C626 314 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 ATP6V0CP27449 155 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 NTSR1P30989 418 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 LPAR6P43657 344 aa4.46□□□□□ -1.69
PCDH9-203ENST00000456367 CDC34P49427 236 aaPredicted RBP4.46□□□□□ -1.69
PCDH9-203ENST00000456367 GPM6AP51674 278 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms