RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SIRT7Q9NRC8 400 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 PLEKHJ1Q9NW61 149 aa12.04□□□□□ -0.48
PTPRE-204ENST00000455661 PCNX3Q9H6A9 2034 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 IGKV1D-8A0A087WSZ0 117 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 IGKV1-9A0A0C4DH69 117 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 A0A1B0GV90 55 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 BTBD17A6NE02 478 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 DHRS7CA6NNS2 312 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 TSTD3H0UI37 97 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 STMND1H3BQB6 276 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 IFNA10P01566 189 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 OR5H8P0DN80 308 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 ALDH3B1P43353 468 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 OR1D4P47884 311 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 CEBPGP53567 150 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 PKIAP61925 76 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 TMEM187Q14656 261 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 GNMTQ14749 295 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 SP6Q3SY56 376 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 TMEM31Q5JXX7 168 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST2H3PS2Q5TEC6 136 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 C1QL2Q7Z5L3 287 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 SLC22A18ASQ8N1D0 253 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 GAS2L1Q99501 681 aaPredicted RBP12.03□□□□□ -0.48
PTPRE-204ENST00000455661 TM2D1Q9BX74 207 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 SUCNR1Q9BXA5 334 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 IGKV3D-11A0A0A0MRZ8 115 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 C5orf67F2Z3F1 127 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BKO60814 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BJP06899 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 OR5AC1P0C628 307 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 RNF224P0DH78 156 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BOP23527 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BBP33778 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BDP58876 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BCP62807 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST2H2BEQ16778 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.03□□□□□ -0.48
PTPRE-204ENST00000455661 SPNS3Q6ZMD2 512 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF429Q86V71 674 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 SLC38A9Q8NBW4 561 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 OR8G5Q8NG78 346 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 OR13D1Q8NGV5 346 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 OR2G3Q8NGZ4 309 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 NPRL2Q8WTW4 380 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BHQ93079 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 TOMM40LQ969M1 308 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 MRGPRX1Q96LB2 322 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BNQ99877 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 HIST1H2BMQ99879 126 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 NUDT22Q9BRQ3 303 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 ZNF319Q9P2F9 582 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
PTPRE-204ENST00000455661 LRP4O75096 1905 aa12.02□□□□□ -0.48
PTPRE-204ENST00000455661 CYB5BO43169 146 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 CXCL1P09341 107 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 TMEM225BP0DP42 221 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 RGS19P49795 217 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF133P52736 654 aaPredicted RBP12.02□□□□□ -0.49
PTPRE-204ENST00000455661 DLK1P80370 383 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF266Q14584 549 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 OGFOD3Q6PK18 319 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 C6orf201Q7Z4U5 140 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 LYZL2Q7Z4W2 148 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 OR14K1Q8NGZ2 314 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.49
PTPRE-204ENST00000455661 TVP23CQ96ET8 276 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 JSRP1Q96MG2 331 aaPredicted RBP12.02□□□□□ -0.49
PTPRE-204ENST00000455661 SERINC1Q9NRX5 453 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 NECAP2Q9NVZ3 263 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 KLHL13Q9P2N7 655 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 MCTS1Q9ULC4 181 aaKnown RBP12.02□□□□□ -0.49
PTPRE-204ENST00000455661 RCL1Q9Y2P8 373 aaKnown RBP12.02□□□□□ -0.49
PTPRE-204ENST00000455661 URGCP-MRPS24S4R325 110 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 PHF3Q92576 2039 aaKnown RBP12.02□□□□□ -0.49
PTPRE-204ENST00000455661 ANKUB1A6NFN9 424 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF850A8MQ14 1090 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 METTL12A8MUP2 240 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 HSD17B6O14756 317 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 BCAT2O15382 392 aaPredicted RBP12.02□□□□□ -0.49
PTPRE-204ENST00000455661 PTBP3O95758 552 aaKnown RBP12.02□□□□□ -0.49
PTPRE-204ENST00000455661 GABRR1P24046 479 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 DDTP30046 118 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 TFF2Q03403 129 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 NSDHLQ15738 373 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 DMRTC1Q5HYR2 192 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF343Q6P1L6 599 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 LIAT1Q6ZQX7 453 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 LGI3Q8N145 548 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 HIST3H2BBQ8N257 126 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 LRTM2Q8N967 370 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 FGF14Q92915 247 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 MEGF10Q96KG7 1140 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 NIPSNAP3BQ9BS92 247 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 ZNF700Q9H0M5 742 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 ALKBH4Q9NXW9 302 aa12.02□□□□□ -0.49
PTPRE-204ENST00000455661 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms