RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 Q8IYB0 196 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 SPICQ8N5J4 248 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 GCSAMQ8N6F7 178 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 NPRL2Q8WTW4 380 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 LRRC29Q8WV35 223 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 NRIP2Q9BQI9 281 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 BPESC1Q9GZL8 116 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 SNTG1Q9NSN8 517 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 TREM2Q9NZC2 230 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 STUB1Q9UNE7 303 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 WIPI2Q9Y4P8 454 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 PPIAL4AQ9Y536 164 aa12.03□□□□□ -0.48
HMGXB4-204ENST00000455359 IGKV1-27A0A075B6S5 117 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 TRAV38-1A0A0B4J264 116 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 GABRPO00591 440 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 IGHV2-70P01814 119 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 PGA5P0DJD9 388 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 PSMD7P51665 324 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 PDZK1IP1Q13113 114 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 TEX36Q5VZQ5 186 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 ZNF826PQ6ZT77 177 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 CALHM1Q8IU99 346 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 PNLDC1Q8NA58 520 aaKnown RBP12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 POC1AQ8NBT0 407 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 FOXRED1Q96CU9 486 aaPredicted RBP12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 REG4Q9BYZ8 158 aa12.02□□□□□ -0.49
HMGXB4-204ENST00000455359 TRAV8-7A0A075B6U6 113 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 TRAV1-2A0A0B4J238 106 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 A0A1W2PPK0 400 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 OOEPA6NGQ2 149 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 CYB5R3P00387 301 aaPredicted RBP12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 HEXAP06865 529 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 CD37P11049 281 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 CD36P16671 472 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 ZNF93P35789 620 aaPredicted RBP12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 INSL4Q14641 139 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 ZMYND11Q15326 602 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 MICBQ29980 383 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 ZNF404Q494X3 552 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 DMRTC1Q5HYR2 192 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 DDI2Q5TDH0 399 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 SLC25A26Q70HW3 274 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 ANGPTL5Q86XS5 388 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 PXT1Q8NFP0 134 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 OR52N4Q8NGI2 321 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 OR51A2Q8NGJ7 313 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 UQCC2Q9BRT2 126 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 METTL17Q9H7H0 456 aaPredicted RBP12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 TMEM165Q9HC07 324 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 DCAF16Q9NXF7 216 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 SSR3Q9UNL2 185 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 GSTK1Q9Y2Q3 226 aa12.01□□□□□ -0.49
HMGXB4-204ENST00000455359 A0A096LNT2 108 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 RHBDL1O75783 438 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 FOSL1P15407 271 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 POU3F4P49335 361 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 BMXP51813 675 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 ZP1P60852 638 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 ERVK11-1P61568 191 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 SMIM21Q3B7S5 101 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 GLT8D1Q68CQ7 371 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 OR13F1Q8NGS4 319 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 TMIGD2Q96BF3 282 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 YIPF6Q96EC8 236 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 CEP19Q96LK0 163 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 GPER1Q99527 375 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 DNTTIP1Q9H147 329 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 PPIL3Q9H2H8 161 aaKnown RBP12□□□□□ -0.49
HMGXB4-204ENST00000455359 HES4Q9HCC6 221 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 PCDHB16Q9NRJ7 776 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 GHRLQ9UBU3 117 aa12□□□□□ -0.49
HMGXB4-204ENST00000455359 IGHV4-61A0A0C4DH41 118 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 ISPDA4D126 451 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 RNF223E7ERA6 249 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 TRAPPC2LH3BP13 241 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 PDCD5O14737 125 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 AKR7A2O43488 359 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 SYNGR1O43759 233 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 ZNF780AO75290 641 aaPredicted RBP11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 KDM4BO94953 1096 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 TMEM225BP0DP42 221 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 GLRA1P23415 457 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 MYL9P24844 172 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 CALRP27797 417 aaKnown RBP11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 PTGFRP43088 359 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 AVPI1Q5T686 147 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 ATPAF1Q5TC12 328 aaPredicted RBP11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 CRIP3Q6Q6R5 217 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 ASCL4Q6XD76 172 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 DCDC5Q6ZRR9 648 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 LRRTM1Q86UE6 522 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 LYPD6Q86Y78 171 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 OR51F2Q8NH61 342 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 ORAI1Q96D31 301 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 RAB39BQ96DA2 213 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 GAL3ST1Q99999 423 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 SEBOXQ9HB31 216 aaPredicted RBP11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 IL36GQ9NZH8 169 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 MTCH1Q9NZJ7 389 aa11.99□□□□□ -0.49
HMGXB4-204ENST00000455359 DNAJB11Q9UBS4 358 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms