RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 FOLR1P15328 257 aa12.24□□□□□ -0.45
UBE2D3-210ENST00000453744 MRPS34P82930 218 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-210ENST00000453744 SLC22A25Q6T423 547 aa12.24□□□□□ -0.45
UBE2D3-210ENST00000453744 ZNF519Q8TB69 540 aa12.24□□□□□ -0.45
UBE2D3-210ENST00000453744 RNF133Q8WVZ7 376 aa12.24□□□□□ -0.45
UBE2D3-210ENST00000453744 BORCS8Q96FH0 119 aa12.24□□□□□ -0.45
UBE2D3-210ENST00000453744 GNG13Q9P2W3 67 aa12.24□□□□□ -0.45
UBE2D3-210ENST00000453744 SMCO3A2RU48 225 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 DBHP09172 617 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 FBP1P09467 338 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 HLA-GP17693 338 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 DCAF7P61962 342 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 ZNF610Q8N9Z0 462 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 NECAP1Q8NC96 275 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 MRGPRFQ96AM1 343 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 BSCL2Q96G97 398 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 ZNF587BE7ETH6 402 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 C1QL2Q7Z5L3 287 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 ARHGEF39Q8N4T4 335 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 POC1AQ8NBT0 407 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 OR14L1PQ8NHC6 308 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 GPR61Q9BZJ8 451 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 TMEM100Q9NV29 134 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 CACNA1EQ15878 2313 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 A0A1W2PQF6 199 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 CXorf65A6NEN9 183 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 IDH3GP51553 393 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 FOXK1P85037 733 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 MFAP5Q13361 173 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 LCN15Q6UWW0 184 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 TMEM92Q6UXU6 159 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 DOK3Q7L591 496 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 ASB10Q8WXI3 467 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 RTBDNQ9BSG5 229 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 FANCMQ8IYD8 2048 aa12.23□□□□□ -0.45
UBE2D3-210ENST00000453744 MYO7BQ6PIF6 2116 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 NSG1A0A0A6YYJ2 146 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 A0A1B0GV90 55 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 DXOO77932 396 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 CSRP1P21291 193 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 TNFRSF4P43489 277 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 C17orf67Q0P5P2 114 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 PNLIPRP3Q17RR3 467 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 NSUN5P2Q63ZY6 315 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 C9orf40Q8IXQ3 194 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 PTX4Q96A99 478 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 LURAP1Q96LR2 239 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 TRBV11-1A0A0K0K1C0 115 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 WIPF3A6NGB9 483 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 NPIPA2E9PIF3 369 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 NPIPA3F8WFD2 350 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 H0YL77 283 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 H3BMH7 237 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 HLA-HP01893 362 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 HPNP05981 417 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 LGI3Q8N145 548 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 OR2AE1Q8NHA4 323 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 MR1Q95460 341 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 GPHA2Q96T91 129 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 PECRQ9BY49 303 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 DOK5Q9P104 306 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 IGHV3-15A0A0B4J1V0 119 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 ATXN7O15265 892 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 LINC01565O15544 149 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 TMEM240Q5SV17 173 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 DEGS2Q6QHC5 323 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 GKN2Q86XP6 184 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 SLC25A43Q8WUT9 341 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 RFNGQ9Y644 331 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 NBASA2RRP1 2371 aa12.22□□□□□ -0.45
UBE2D3-210ENST00000453744 FCGR3AP08637 254 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 DUSP1P28562 367 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 SNCAP37840 140 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 NKX2-1P43699 371 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 CSNK1A1P48729 337 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 SUPT4H1P63272 117 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 MYBPHQ13203 477 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 ARL6IP1Q15041 203 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 RAET1LQ5VY80 246 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 BTNL8Q6UX41 500 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 CPNE4Q96A23 557 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 NKX2-4Q9H2Z4 354 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 GAB2Q9UQC2 676 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 A0A0A6YYD4 124 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 A6NCN8 305 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 TMEM14DPA8MWL7 114 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 IFNA5P01569 189 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 OR8U8P0C7N1 319 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 CAPZBP47756 277 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 RAB1AP62820 205 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 VAX1Q5SQQ9 334 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 CMTM1Q8IZ96 169 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 CA5BP1Q8WTZ4 195 aa12.21□□□□□ -0.45
UBE2D3-210ENST00000453744 SRPK3Q9UPE1 567 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms