RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
SGCE-208ENST00000450385 SEBOXQ9HB31 216 aaPredicted RBP13.19□□□□□ -0.3
SGCE-208ENST00000450385 IMPAD1Q9NX62 359 aa13.19□□□□□ -0.3
SGCE-208ENST00000450385 ONECUT1Q9UBC0 465 aa13.19□□□□□ -0.3
SGCE-208ENST00000450385 ZNF222Q9UK12 451 aa13.19□□□□□ -0.3
SGCE-208ENST00000450385 IGKV1D-17A0A075B6S4 117 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 PQLC2LA1A4F0 135 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 SLC1A7O00341 560 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 RHBDL1O75783 438 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 GATBO75879 557 aaKnown RBP13.18□□□□□ -0.3
SGCE-208ENST00000450385 UBCP0CG48 685 aaKnown RBP13.18□□□□□ -0.3
SGCE-208ENST00000450385 NDUFB7P17568 137 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 IER3P46695 156 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 HAAOP46952 286 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 GABRA2P47869 451 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 ACTC1P68032 377 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 ACTA1P68133 377 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 MFGE8Q08431 387 aaPredicted RBP13.18□□□□□ -0.3
SGCE-208ENST00000450385 IL24Q13007 206 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 DGUOKQ16854 277 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 CCDC121Q6ZUS5 278 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 FAM220AQ7Z4H9 259 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 PP6455Q8WZ26 134 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 H1FXQ92522 213 aaKnown RBP13.18□□□□□ -0.3
SGCE-208ENST00000450385 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 RIBC2Q9H4K1 309 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 PLEKHA1Q9HB21 404 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 SNTG1Q9NSN8 517 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 GTF2A1LQ9UNN4 478 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 TRRAPQ9Y4A5 3859 aa13.18□□□□□ -0.3
SGCE-208ENST00000450385 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 SYT7O43581 403 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 MPZL2O60487 215 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 ALDH3A2P51648 485 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 FUT6P51993 359 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 ISL1P61371 349 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 OCLNQ16625 522 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 PRR31Q5SQ13 230 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 TMEM244Q5VVB8 128 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 FDX2Q6P4F2 183 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 GDPGP1Q6ZNW5 385 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 Q8IYB0 196 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 Q8N7P7 452 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 DTX3Q8N9I9 347 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 OR10H4Q8NGA5 316 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 RORBQ92753 470 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 PPP1R14AQ96A00 147 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 NRIP2Q9BQI9 281 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 HES4Q9HCC6 221 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 SF3B6Q9Y3B4 125 aaKnown RBP13.17□□□□□ -0.3
SGCE-208ENST00000450385 MAB21L2Q9Y586 359 aa13.17□□□□□ -0.3
SGCE-208ENST00000450385 A0A1B0GW55 424 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 A0A1W2PQ09 198 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 BTBD17A6NE02 478 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 ANKRD61A6NGH8 418 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 RFPL4AA6NLU0 287 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 E9PQ18 207 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 RFPL4AL1F8VTS6 287 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 SPRY1O43609 319 aaPredicted RBP13.16□□□□□ -0.3
SGCE-208ENST00000450385 NXPH2O95156 264 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 KNG1P01042 644 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 ISG15P05161 165 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 DUX4L2P0CJ85 424 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 DUX4L3P0CJ86 424 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 DUX4L4P0CJ87 422 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 DUX4L5P0CJ88 424 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 DUX4L6P0CJ89 424 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 DUX4L7P0CJ90 424 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 PRDX2P32119 198 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 POLR2IP36954 125 aaKnown RBP13.16□□□□□ -0.3
SGCE-208ENST00000450385 MIDNQ504T8 468 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 RUSC1-AS1Q66K80 236 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 DUX4L9Q6RFH8 374 aaPredicted RBP13.16□□□□□ -0.3
SGCE-208ENST00000450385 DNAAF1Q8NEP3 725 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 OR5R1Q8NH85 324 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 HAVCR2Q8TDQ0 301 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 PYDC1Q8WXC3 89 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 TNFRSF14Q92956 283 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 Q96MT0 163 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 HEXA-AS1Q9H8Q6 139 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 DUX4Q9UBX2 424 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 SOX21Q9Y651 276 aaPredicted RBP13.16□□□□□ -0.3
SGCE-208ENST00000450385 PKD1L1Q8TDX9 2849 aa13.16□□□□□ -0.3
SGCE-208ENST00000450385 MDFIC2A0A1B0GVS7 189 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 M0R129 80 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 NPFFO15130 113 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 RPP14O95059 124 aaKnown RBP13.15□□□□□ -0.3
SGCE-208ENST00000450385 CCR9P51686 369 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 GMFBP60983 142 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 ERVK11-1P61568 191 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 AANATQ16613 207 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 FIP1L1Q6UN15 594 aaKnown RBP13.15□□□□□ -0.3
SGCE-208ENST00000450385 ENTHD1Q8IYW4 607 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 ZNRF1Q8ND25 227 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 C9orf16Q9BUW7 83 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 CHIAQ9BZP6 476 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 CHST5Q9GZS9 411 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 RHOFQ9HBH0 211 aa13.15□□□□□ -0.3
SGCE-208ENST00000450385 A0A0U1RQK1 487 aa13.14□□□□□ -0.31
SGCE-208ENST00000450385 SAC3D1A6NKF1 404 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms