RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CLPXO76031 633 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 BPNT1O95861 308 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 CD8AP01732 235 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 BMXP51813 675 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 GMFBP60983 142 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 RSU1Q15404 277 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 C2orf76Q3KRA6 126 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 FAM76BQ5HYJ3 339 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 OR10K2Q6IF99 312 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 C11orf71Q6IPW1 123 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 MZT2AQ6P582 158 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 ZNF826PQ6ZT77 177 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 DTX2Q86UW9 622 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 MOGAT3Q86VF5 341 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 SAMD12Q8N8I0 201 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 ACOT12Q8WYK0 555 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 AQP3Q92482 292 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 ZNF488Q96MN9 340 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 TRAF4Q9BUZ4 470 aaPredicted RBP12.39□□□□□ -0.43
TNF-208ENST00000449264 CACNG6Q9BXT2 260 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 NXF2Q9GZY0 626 aaKnown RBP12.39□□□□□ -0.43
TNF-208ENST00000449264 SAP30LQ9HAJ7 183 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 IL19Q9UHD0 177 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 USF3Q68DE3 2245 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 SPG11Q96JI7 2443 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 CELSR2Q9HCU4 2923 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 DYSFO75923 2080 aa12.39□□□□□ -0.43
TNF-208ENST00000449264 IGKV1-12A0A0C4DH73 117 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 TMEM272A0A1B0GTI8 110 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 A0A1W2PP11 408 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 CTDSP2O14595 271 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 HPGDSO60760 199 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 IGKV1D-12P01611 117 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 ADH4P08319 380 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 CALCBP10092 127 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 BMP4P12644 408 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 RBMXP38159 391 aaKnown RBP12.38□□□□□ -0.43
TNF-208ENST00000449264 PPOXP50336 477 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 PLA2G7Q13093 441 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 FAM209AQ5JX71 171 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 LAX1Q8IWV1 398 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 ZNF295-AS1Q8N0V1 137 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 TBC1D15Q8TC07 691 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 C1orf147Q96MC9 270 aaPredicted RBP12.38□□□□□ -0.43
TNF-208ENST00000449264 GAL3ST1Q99999 423 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 PKIBQ9C010 78 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 EGLN1Q9GZT9 426 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 METTL9Q9H1A3 318 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 MMP27Q9H306 513 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 PLEKHF2Q9H8W4 249 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 C1orf123Q9NWV4 160 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 POLDIP2Q9Y2S7 368 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 ABCA12Q86UK0 2595 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 A0A075B6Q4 140 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 TMEM127O75204 238 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 CRTAPO75718 401 aaPredicted RBP12.38□□□□□ -0.43
TNF-208ENST00000449264 HTR3BO95264 441 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 CD55P08174 381 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 UBBP0CG47 229 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 VSIG8P0DPA2 414 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 BCL3P20749 454 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 MPZP25189 248 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 NPBWR2P48146 333 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 IL24Q13007 206 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 TESK1Q15569 626 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 PCGF3Q3KNV8 242 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 HIST2H2BCQ6DN03 193 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 MKXQ8IYA7 352 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 CELF2-AS1Q8N7Q2 184 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 PXT1Q8NFP0 134 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 MRI1Q9BV20 369 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 TLNRD1Q9H1K6 362 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 BANF2Q9H503 90 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 FN3KRPQ9HA64 309 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 SPATA2Q9UM82 520 aa12.38□□□□□ -0.43
TNF-208ENST00000449264 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 AKR7A2O43488 359 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 PTBP3O95758 552 aaKnown RBP12.37□□□□□ -0.43
TNF-208ENST00000449264 MPIG6BO95866 241 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 CSTBP04080 98 aaKnown RBP12.37□□□□□ -0.43
TNF-208ENST00000449264 SFTPBP07988 381 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 S100A5P33763 92 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 CDKN1AP38936 164 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 EFNB2P52799 333 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 HOXA4Q00056 320 aaPredicted RBP12.37□□□□□ -0.43
TNF-208ENST00000449264 UNC119Q13432 240 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 WDR82Q6UXN9 313 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 C20orf204Q6ZNR8 217 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 C11orf53Q8IXP5 236 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 ZSCAN4Q8NAM6 433 aaPredicted RBP12.37□□□□□ -0.43
TNF-208ENST00000449264 TMEM104Q8NE00 496 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 CST11Q9H112 138 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 GCM1Q9NP62 436 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 RBFOX1Q9NWB1 397 aaKnown RBP12.37□□□□□ -0.43
TNF-208ENST00000449264 MTCH1Q9NZJ7 389 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 GHRLQ9UBU3 117 aa12.37□□□□□ -0.43
TNF-208ENST00000449264 ETV7Q9Y603 341 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms