RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 VGLL3A8MV65 326 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 FBXO24O75426 580 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 E2F6O75461 281 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 NXPH2O95156 264 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 ATP6V1B2P21281 511 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 HAAOP46952 286 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 LOXL3P58215 753 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 NSUN5P1Q3KNT7 163 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 ARSJQ5FYB0 599 aaPredicted RBP10.79□□□□□ -0.68
HMGB3-204ENST00000448905 LCN8Q6JVE9 175 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 POC1AQ8NBT0 407 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 OR4M1Q8NGD0 313 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 OR13D1Q8NGV5 346 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 RPS4Y2Q8TD47 263 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 R3HDM4Q96D70 268 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 CHID1Q9BWS9 393 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 PBOV1Q9GZY1 135 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 ZNF222Q9UK12 451 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 PIGLQ9Y2B2 252 aa10.79□□□□□ -0.68
HMGB3-204ENST00000448905 ATP8B1O43520 1251 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 NOS1APO75052 506 aaPredicted RBP10.78□□□□□ -0.68
HMGB3-204ENST00000448905 ALDOBP05062 364 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 OSMP13725 252 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 COX7A1P24310 79 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 BMXP51813 675 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 OR12D2P58182 307 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 ZNF829Q3KNS6 432 aaPredicted RBP10.78□□□□□ -0.68
HMGB3-204ENST00000448905 CLVS2Q5SYC1 327 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 HIST2H2BDQ6DRA6 164 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 Q6ZPA2 131 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 NDUFA11Q86Y39 141 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 ZNF679Q8IYX0 411 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 CD177Q8N6Q3 437 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 OR51E1Q8TCB6 317 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 MRAPQ8TCY5 172 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 FOXRED1Q96CU9 486 aaPredicted RBP10.78□□□□□ -0.68
HMGB3-204ENST00000448905 AJUBAQ96IF1 538 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 NSL1Q96IY1 281 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 TEAD3Q99594 435 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 FGF23Q9GZV9 251 aaPredicted RBP10.78□□□□□ -0.68
HMGB3-204ENST00000448905 GPR84Q9NQS5 396 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 NECAP2Q9NVZ3 263 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 VNN3Q9NY84 501 aa10.78□□□□□ -0.68
HMGB3-204ENST00000448905 TBL2Q9Y4P3 447 aaKnown RBP10.78□□□□□ -0.68
HMGB3-204ENST00000448905 FAM90A8PA6NJQ4 464 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 DLGAP1O14490 977 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 DHRS3O75911 302 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.69
HMGB3-204ENST00000448905 TK1P04183 234 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 ARG1P05089 322 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 ANXA8P13928 327 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 RIDAP52758 137 aaKnown RBP10.77□□□□□ -0.69
HMGB3-204ENST00000448905 HCCSP53701 268 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 ESRRGP62508 458 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 CDK5Q00535 292 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 CNN3Q15417 329 aaKnown RBP10.77□□□□□ -0.69
HMGB3-204ENST00000448905 TRPM8Q7Z2W7 1104 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 PIGWQ7Z7B1 504 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 PIFOQ8TCI5 191 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 FAM206AQ9NX38 181 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 H2AFY2Q9P0M6 372 aaPredicted RBP10.77□□□□□ -0.69
HMGB3-204ENST00000448905 IKZF2Q9UKS7 526 aa10.77□□□□□ -0.69
HMGB3-204ENST00000448905 NOTCH1P46531 2555 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 J3QT63 122 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 CHRM2P08172 466 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 PGA5P0DJD9 388 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 RAB13P51153 203 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 CBX1P83916 185 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 MS4A2Q01362 244 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 ROM1Q03395 351 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 DYNC1I2Q13409 638 aaKnown RBP10.76□□□□□ -0.69
HMGB3-204ENST00000448905 APOFQ13790 326 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 SNAPC1Q16533 368 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 OXLD1Q5BKU9 147 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 DMRTC1Q5HYR2 192 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 ASRGL1Q7L266 308 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 GDPD3Q7L5L3 318 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 Q8N2B8 174 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 C11orf42Q8N5U0 333 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 ASB9Q96DX5 294 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 TAS2R1Q9NYW7 299 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 OR14J1Q9UGF5 321 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 NUFIP1Q9UHK0 495 aaKnown RBP10.76□□□□□ -0.69
HMGB3-204ENST00000448905 GTF2A1LQ9UNN4 478 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 SLC7A11Q9UPY5 501 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 TCF19Q9Y242 345 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 KLHDC2Q9Y2U9 406 aa10.76□□□□□ -0.69
HMGB3-204ENST00000448905 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 K7N7A8 449 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 PSMD9O00233 223 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 RBP4P02753 201 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 ZNF728P0DKX0 622 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 CD28P10747 220 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 CCL3L1P16619 93 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 PAX6P26367 422 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 SSX2Q16385 188 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 ZNF782Q6ZMW2 699 aaPredicted RBP10.75□□□□□ -0.69
HMGB3-204ENST00000448905 LHFPL4Q7Z7J7 247 aa10.75□□□□□ -0.69
HMGB3-204ENST00000448905 LYG1Q8N1E2 194 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms