RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MED20Q9H944 212 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 ST3GAL6Q9Y274 331 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 H3BMH7 237 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 MC5RP33032 325 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 SLC25A30Q5SVS4 291 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 Q6ZNX1 250 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 ISCA2Q86U28 154 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 OR5C1Q8NGR4 320 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 PTGDR2Q9Y5Y4 395 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 TCRBV5S4A2TA0A5A2 114 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 TMEM250H0YL14 139 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 MBTPS2O43462 519 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 GPANK1O95872 356 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 CYBAP13498 195 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 CST5P28325 142 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 MAGT1Q9H0U3 335 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 EDA2RQ9HAV5 297 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 DNAJB12Q9NXW2 375 aaKnown RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 MADDQ8WXG6 1647 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 TMED7-TICAM2A0A0A6YYA0 188 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 KBTBD11-OT1A0A1B0GTJ5 212 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 FITM1A5D6W6 292 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 DDNO94850 711 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 IGHA1P01876 353 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 IGHA2P01877 340 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 HLA-DRB1P01911 266 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 TRGC1P0CF51 173 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 SRSF4Q08170 494 aaKnown RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 MRM1Q6IN84 353 aaKnown RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 SLC35E3Q7Z769 313 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 NPEPL1Q8NDH3 523 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 ZC3HAV1LQ96H79 300 aaKnown RBP8.08□□□□□ -1.12
NIPBL-202ENST00000448238 IL17FQ96PD4 163 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 SLC25A22Q9H936 323 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 TMED7Q9Y3B3 224 aa8.08□□□□□ -1.12
NIPBL-202ENST00000448238 SNURFLB1AK76 121 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 SLC25A17O43808 307 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 FOLR2P14207 255 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 SRP14P37108 136 aaKnown RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 MRPL58Q14197 206 aaKnown RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 CADM3Q8N126 398 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 OSR2Q8N2R0 312 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 ZNF480Q8WV37 535 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 TRBV4-1A0A0J9YWV2 114 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 ADM5C9JUS6 153 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 IGHV4-34P06331 123 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 CKS1BP61024 79 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 WDR25Q64LD2 544 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 LINC00346Q8IVM7 164 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 ABCC6O95255 1503 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 POLR2AP24928 1970 aaKnown RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 K7EQS6 105 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 NDUFB3O43676 98 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 FGF18O76093 207 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 RNF224P0DH78 156 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 HTN1P15515 57 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 SDC1P18827 310 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 FUT6P51993 359 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 UBE2V2Q15819 145 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 C18orf21Q32NC0 220 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 XKR7Q5GH72 579 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 YOD1Q5VVQ6 348 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 OR10G4Q8NGN3 311 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 OR10G9Q8NGN4 311 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 OR10G7Q8NGN6 311 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 SMIM19Q96E16 107 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 C16orf70Q9BSU1 422 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 AICDAQ9GZX7 198 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 TAAR3PQ9P1P4 343 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 NID2Q14112 1375 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 TECPR2O15040 1411 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 EPXP11678 715 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 OPRM1P35372 400 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 DUSP8Q13202 625 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 C1orf61Q13536 156 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 Q5PR19 223 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 NIT1Q86X76 327 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 MRPL30Q8TCC3 161 aaKnown RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 USP32Q8NFA0 1604 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 HOXC4P09017 264 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 FTH1P19P0C7X4 201 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 PIPP12273 146 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 CKS2P33552 79 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 RAG2P55895 527 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 LYPD8Q6UX82 237 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 MYOZ1Q9NP98 299 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 TBX21Q9UL17 535 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 INHBCP55103 352 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 RPL27P61353 136 aaKnown RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 RNPS1Q15287 305 aaKnown RBP8.07□□□□□ -1.12
NIPBL-202ENST00000448238 ELFN2Q5R3F8 820 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 TCF24Q7RTU0 167 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 FAM219AQ8IW50 185 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 GBGT1Q8N5D6 347 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 MDGA1Q8NFP4 955 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 EGLN2Q96KS0 407 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 CXorf1O96002 111 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 SOD3P08294 240 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 ADRA1AP35348 466 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms