RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 UBAC2Q8NBM4 344 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR6X1Q8NH79 312 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 NT5CQ8TCD5 201 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 FLYWCH2Q96CP2 140 aaKnown RBP3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 WDR34Q96EX3 536 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 WFIKKN1Q96NZ8 548 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 RBBP8Q99708 897 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 RSG1Q9BU20 258 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNF426Q9BUY5 554 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 SHCBP1LQ9BZQ2 653 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 PARP12Q9H0J9 701 aaKnown RBP3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 DSN1Q9H410 356 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 METTL8Q9H825 291 aaKnown RBP3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 DDIT4Q9NX09 232 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNF226Q9NYT6 803 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 CD84Q9UIB8 345 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 FBXL3Q9UKT7 428 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 TFR2Q9UP52 801 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 SLC7A11Q9UPY5 501 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 USH1CQ9Y6N9 552 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 NEXMIFQ5QGS0 1516 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 POLR3AO14802 1390 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 DHX57Q6P158 1386 aaKnown RBP3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 BRCA1P38398 1863 aaKnown RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 KLLNB2CW77 178 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 PSIP1O75475 530 aaKnown RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 SUPT3HO75486 399 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 SNAP29O95721 258 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 DNAH10OSP0CZ25 163 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 PSKH1P11801 424 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 CRISP2P16562 243 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 CD70P32970 193 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 RPS9P46781 194 aaKnown RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 CYB561P49447 251 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 SYNJ2BPP57105 145 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 MTPNP58546 118 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 UBE2NP61088 152 aaKnown RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 IGLV3-21P80748 117 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 IL5RAQ01344 420 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 CD164Q04900 197 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 TRIP13Q15645 432 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 PIGGQ5H8A4 983 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 SYT6Q5T7P8 510 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 STEAP4Q687X5 459 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 SLC34A3Q8N130 599 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 SPICQ8N5J4 248 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 LFNGQ8NES3 379 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR2L5Q8NG80 312 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR51Q1Q8NH59 317 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR2AE1Q8NHA4 323 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 DNAJB3Q8WWF6 145 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 NXF2Q9GZY0 626 aaKnown RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 LINC00597Q9H2U6 94 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 SPNS1Q9H2V7 528 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 DEC1Q9P2X7 70 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 NDRG2Q9UN36 371 aaKnown RBP3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 ELP1O95163 1332 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 USP32Q8NFA0 1604 aa3.11□□□□□ -1.91
HMGB1P48-201ENST00000446155 TDRD6O60522 2096 aaKnown RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 IGHV1-69DA0A0B4J2H0 117 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 KIR2DS1A0A191URI9 304 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 GOLGA8KD6RF30 607 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 GOLGA8MH3BSY2 632 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 J3QT63 122 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 CRXO43186 299 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 CTSLP07711 333 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 KRT7P08729 469 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 LIMS3P0CW19 117 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 LIMS4P0CW20 117 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 NEFHP12036 1026 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 HLA-DMAP28067 261 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 GTF2H1P32780 548 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 RPA3P35244 121 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 MAGEA2P43356 314 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 HAAOP46952 286 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 CAV2P51636 162 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 CDKN2DP55273 166 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 RAB38P57729 211 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 NUP107P57740 925 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 TAS2R31P59538 309 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 MED21Q13503 144 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 PON2Q15165 354 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 TOMM34Q15785 309 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 PRSS8Q16651 343 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 CDNFQ49AH0 187 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 C9orf129Q5T035 196 aaKnown RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 HES5Q5TA89 166 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 SDHAF4Q5VUM1 108 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 KHDRBS2Q5VWX1 349 aaKnown RBP3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 NIPAL1Q6NVV3 410 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 LYPD2Q6UXB3 125 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 IL34Q6ZMJ4 242 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 C11orf53Q8IXP5 236 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 CYP4Z2PQ8N1L4 340 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 GAPTQ8N292 157 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR4K17Q8NGC6 315 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR8J2Q8NGG1 315 aa3.1□□□□□ -1.91
HMGB1P48-201ENST00000446155 DYNC2LI1Q8TCX1 351 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms