RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 MFSD8Q8NHS3 518 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 CNIH3Q8TBE1 160 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF502Q8TBZ5 544 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ZPLD1Q8TCW7 415 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RNF128Q8TEB7 428 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 DCAKDQ8WVC6 231 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 APOBEC3DQ96AK3 386 aaPredicted RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ISOC1Q96CN7 298 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SMIM8Q96KF7 97 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SLC35G5Q96KT7 338 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 FCRL1Q96LA6 429 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF681Q96N22 645 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SCGB3A2Q96PL1 93 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 OR52B2Q96RD2 323 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 PRR25Q96S07 402 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 TP53RKQ96S44 253 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF347Q96SE7 839 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ATOH8Q96SQ7 321 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SORT1Q99523 831 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF184Q99676 751 aaPredicted RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 FOXC2Q99958 501 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RARRES2Q99969 163 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 MACROD1Q9BQ69 325 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 APOOQ9BUR5 198 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 PITPNM3Q9BZ71 974 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SLC25A39Q9BZJ4 359 aaPredicted RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ULBP3Q9BZM4 244 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 COA1Q9GZY4 146 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 MRPL18Q9H0U6 180 aaKnown RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 IFI27L2Q9H2X8 130 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RERGLQ9H628 205 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 REEP1Q9H902 201 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 NANOGQ9H9S0 305 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 GALNT9Q9HCQ5 603 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SH2D2AQ9NP31 389 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RBFOX1Q9NWB1 397 aaKnown RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 AURKAIP1Q9NWT8 199 aaPredicted RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 IDI2-AS1Q9NZ38 188 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 DNAJC27Q9NZQ0 273 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RPS6KB2Q9UBS0 482 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 TBX21Q9UL17 535 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 KLF12Q9Y4X4 402 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 RAI2Q9Y5P3 530 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 SPIN1Q9Y657 262 aaPredicted RBP2.39□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF780BQ9Y6R6 833 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 CAMSAP2Q08AD1 1489 aa2.39□□□□□ -2.03
UBBP3-201ENST00000445497 PALLDQ8WX93 1383 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 TRAV36DV7A0A075B6V5 113 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 A0A0G2JLL6 359 aaPredicted RBP2.38□□□□□ -2.03
UBBP3-201ENST00000445497 TEX50A0A1B0GTY4 177 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 MYOCOSA0A1B0GUC4 107 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 HMX2A2RU54 273 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GAGE12JA6NER3 117 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 SIGLEC16A6NMB1 481 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 TCP10L2B9ZVM9 353 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 NPIPB9F8W1W9 429 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 INMT-MINDY4F8WBC2 141 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 DNASE2O00115 360 aaPredicted RBP2.38□□□□□ -2.03
UBBP3-201ENST00000445497 CCL21O00585 134 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 HSD17B6O14756 317 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 TNFSF12O43508 249 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 BUB3O43684 328 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 ITM2AO43736 263 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 RAMP1O60894 148 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 TBL1XO60907 577 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 CRLF1O75462 422 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GAGE7O76087 117 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 NDUFC2O95298 119 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 CLIC3O95833 236 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 HPRT1P00492 218 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 KNG1P01042 644 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 OPN1SWP03999 348 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 FABP3P05413 133 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 TFAP2AP05549 437 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GAGE12FP0CL80 117 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GAGE12GP0CL81 117 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GAGE12IP0CL82 117 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 ESDP10768 282 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GP1BBP13224 206 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 IL7P13232 177 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 WT1P19544 449 aaPredicted RBP2.38□□□□□ -2.03
UBBP3-201ENST00000445497 TCN2P20062 427 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GPR183P32249 361 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GABRA2P47869 451 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GNG4P50150 75 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 LHX2P50458 406 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 EMP1P54849 157 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 CTBP2P56545 445 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 ERVFC1-1P60608 527 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 PFN3P60673 137 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 RPS18P62269 152 aaKnown RBP2.38□□□□□ -2.03
UBBP3-201ENST00000445497 SLC35A2P78381 396 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 TNFAIP6P98066 277 aaPredicted RBP2.38□□□□□ -2.03
UBBP3-201ENST00000445497 PSG9Q00887 426 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 RPL18AQ02543 176 aaKnown RBP2.38□□□□□ -2.03
UBBP3-201ENST00000445497 FOXL1Q12952 345 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 GAGE4Q13068 117 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 NAIPQ13075 1403 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 HTR4Q13639 388 aa2.38□□□□□ -2.03
UBBP3-201ENST00000445497 FZD2Q14332 565 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms