RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 PPP1R1AQ13522 171 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 EDDM3AQ14507 147 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 ARHGAP11BQ3KRB8 267 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 LIN52Q52LA3 116 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 TNFAIP8L2Q6P589 184 aaPredicted RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 CNIH2Q6PI25 160 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 ZBED9Q6R2W3 1325 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 RASSF6Q6ZTQ3 369 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 FAM231DQ6ZW35 169 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 LRRC25Q8N386 305 aaPredicted RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 BEST4Q8NFU0 473 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 GPR32P1Q8NGA4 272 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 OR4F15Q8NGB8 312 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 OR52E2Q8NGJ4 325 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 EEF1AKMT1Q8WVE0 214 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 LZICQ8WZA0 190 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 TCEAL4Q96EI5 215 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 PGLYRP3Q96LB9 341 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 P2RX4Q99571 388 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 TSC22D3Q99576 134 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 TIPINQ9BVW5 301 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 MS4A6AQ9H2W1 248 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 BOLA2Q9H3K6 86 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 UGT1A8Q9HAW9 530 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 MYOZ1Q9NP98 299 aaPredicted RBP3.57□□□□□ -1.84
VPS50-206ENST00000443443 DNAJC27Q9NZQ0 273 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 ENOPH1Q9UHY7 261 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 PLEKHG1Q9ULL1 1385 aa3.57□□□□□ -1.84
VPS50-206ENST00000443443 TGIF2-C20orf24A0A0A6YYL0 155 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 A0A0B4J2A0 478 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 A0A0G2JLM5 398 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 SYCE1LA8MT33 242 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 KLLNB2CW77 178 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 M0QZK8 103 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 PLIN3O60664 434 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 GALR3O60755 368 aaPredicted RBP3.56□□□□□ -1.84
VPS50-206ENST00000443443 SMIM24O75264 130 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 CNMDO75829 334 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 UPK1BO75841 260 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 SEMA4FO95754 770 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 PTHP01270 115 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 CTSLP07711 333 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 MRPL3P09001 348 aaKnown RBP3.56□□□□□ -1.84
VPS50-206ENST00000443443 NBEAP1P0C6P0 100 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 SLC35G6P0C7Q6 338 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 PGA5P0DJD9 388 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 CD37P11049 281 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 CD99P14209 185 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 FOLR1P15328 257 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 MYL9P24844 172 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 ADORA1P30542 326 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 CCR7P32248 378 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 GCKP35557 465 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 SERPINB5P36952 375 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 PPICP45877 212 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 RPS9P46781 194 aaKnown RBP3.56□□□□□ -1.84
VPS50-206ENST00000443443 GCLMP48507 274 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 EIF4EBP2Q13542 120 aaPredicted RBP3.56□□□□□ -1.84
VPS50-206ENST00000443443 TSNQ15631 228 aaKnown RBP3.56□□□□□ -1.84
VPS50-206ENST00000443443 TOMM34Q15785 309 aaPredicted RBP3.56□□□□□ -1.84
VPS50-206ENST00000443443 NDUFA5Q16718 116 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 C4orf26Q17RF5 130 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 TMEM97Q5BJF2 176 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 HIST2H3PS2Q5TEC6 136 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 C1orf146Q5VVC0 180 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 FAM71E1Q6IPT2 247 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 WDR74Q6RFH5 385 aaPredicted RBP3.56□□□□□ -1.84
VPS50-206ENST00000443443 BAIAP2L2Q6UXY1 529 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 OLIG3Q7RTU3 272 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 COMMD7Q86VX2 200 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 DHFR2Q86XF0 187 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 RDH10Q8IZV5 341 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 ZADH2Q8N4Q0 377 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 GATD1Q8NB37 220 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 TMEM161BQ8NDZ6 487 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 OR10G7Q8NGN6 311 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 NT5CQ8TCD5 201 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 ZFP90Q8TF47 636 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 SLC25A38Q96DW6 304 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 OR10C1Q96KK4 312 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 PGLYRP4Q96LB8 373 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 SELENOIQ9C0D9 397 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 ARV1Q9H2C2 271 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 PARLQ9H300 379 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 CALYQ9NYX4 217 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 SPRR3Q9UBC9 169 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 SHPKQ9UHJ6 478 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 ANXA10Q9UJ72 324 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 MOKQ9UQ07 419 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 TRAPPC4Q9Y296 219 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 TP53TG5Q9Y2B4 290 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 V9GY05 133 aa3.56□□□□□ -1.84
VPS50-206ENST00000443443 IGKV1D-8A0A087WSZ0 117 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 TRAV8-4A0A0B4J246 113 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 RBMY1BA6NDE4 496 aaKnown RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 RBMY1EA6NEQ0 496 aaKnown RBP3.55□□□□□ -1.84
VPS50-206ENST00000443443 METTL15A6NJ78 407 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 OR11H12B2RN74 326 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 LAD1O00515 517 aa3.55□□□□□ -1.84
VPS50-206ENST00000443443 TCAPO15273 167 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms