RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 TBC1D23Q9NUY8 699 aa8.05□□□□□ -1.12
SYN3-204ENST00000441821 SCN3BQ9NY72 215 aa8.05□□□□□ -1.12
SYN3-204ENST00000441821 KCNG2Q9UJ96 466 aa8.05□□□□□ -1.12
SYN3-204ENST00000441821 PITPNC1Q9UKF7 332 aa8.05□□□□□ -1.12
SYN3-204ENST00000441821 TSSC4Q9Y5U2 329 aaPredicted RBP8.05□□□□□ -1.12
SYN3-204ENST00000441821 TCRBV4S1A1TA0A5B7 111 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 UNC119BA6NIH7 251 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 F2RL2O00254 374 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 SLC16A6O15403 523 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 XRCC2O43543 280 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 SYNGR1O43759 233 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 TNFAIP8O95379 198 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 CLIC3O95833 236 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 RENP00797 406 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 IFNGP01579 166 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 HLA-DQA2P01906 255 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 TFF1P04155 84 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 NOS3P29474 1203 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 SLC6A6P31641 620 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 OMPP47874 163 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 RAB13P51153 203 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 CRISP1P54107 249 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 GMFBP60983 142 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 BLCAPP62952 87 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 FAM3AP98173 230 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 IL5RAQ01344 420 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 PPP1R8Q12972 351 aaKnown RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 ZIK1Q3SY52 487 aaPredicted RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 TCTEX1D4Q5JR98 221 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 RASSF6Q6ZTQ3 369 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 THAP5Q7Z6K1 395 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 TMEM219Q86XT9 240 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 OR2T33Q8NG76 320 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 RPS4Y2Q8TD47 263 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 TRUB1Q8WWH5 349 aaKnown RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 ERMAPQ96PL5 475 aaPredicted RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 NMNAT3Q96T66 252 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 MYCBPQ99417 103 aaPredicted RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 YTHDF1Q9BYJ9 559 aaKnown RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 RPRD1BQ9NQG5 326 aaKnown RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 ABCB10Q9NRK6 738 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 FAM118AQ9NWS6 357 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 MRPL22Q9NWU5 206 aaKnown RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 H2AFY2Q9P0M6 372 aaPredicted RBP8.04□□□□□ -1.12
SYN3-204ENST00000441821 LRP12Q9Y561 859 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 PCDHGB5Q9Y5G0 923 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 CDH10Q9Y6N8 788 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 HYDINQ4G0P3 5121 aa8.04□□□□□ -1.12
SYN3-204ENST00000441821 CSMD3Q7Z407 3707 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 A0A1W2PPH5 198 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 IRGMA1A4Y4 181 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 MAGEA13PA6NCF6 341 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 ARPC3O15145 178 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 RHBDL1O75783 438 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 ZFPL1O95159 310 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 GASTP01350 101 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 ZNF823P16415 610 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 MYF6P23409 242 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 LMO1P25800 156 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 DAPP51397 102 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 TMEM95Q3KNT9 176 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 CASC10Q5T4H9 136 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 SMARCD3Q6STE5 483 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 SLC16A9Q7RTY1 509 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 LHFPL4Q7Z7J7 247 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 CENPVQ7Z7K6 275 aaPredicted RBP8.03□□□□□ -1.12
SYN3-204ENST00000441821 TMEM179BQ7Z7N9 219 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 HS3ST5Q8IZT8 346 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 FAM185AQ8N0U4 392 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 DYNAPQ8N1N2 210 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 C11orf42Q8N5U0 333 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 LINC00482Q8N8I6 264 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 OR9Q2Q8NGE9 314 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 FANK1Q8TC84 345 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 RFKQ969G6 155 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 FOXRED1Q96CU9 486 aaPredicted RBP8.03□□□□□ -1.12
SYN3-204ENST00000441821 MALSU1Q96EH3 234 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 KCNJ15Q99712 375 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 MICU1Q9BPX6 476 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 ELL3Q9HB65 397 aaPredicted RBP8.03□□□□□ -1.12
SYN3-204ENST00000441821 CLN6Q9NWW5 311 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 VNN3Q9NY84 501 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 ZMAT5Q9UDW3 170 aaKnown RBP8.03□□□□□ -1.12
SYN3-204ENST00000441821 SCOCQ9UIL1 159 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 TPRKBQ9Y3C4 175 aa8.03□□□□□ -1.12
SYN3-204ENST00000441821 STAB2Q8WWQ8 2551 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 hCG_1809904A0A1W2PP81 198 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 A0A1W2PPE2 198 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 A0A1W2PR64 198 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 A0A1W2PRV1 198 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 OR6C68A6NDL8 312 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 TMEM210A6NLX4 147 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 OR2AT4A6NND4 320 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 RIIAD1A6NNX1 92 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 AKR7A2O43488 359 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 SLC2A1P11166 492 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 HIST1H1CP16403 213 aaKnown RBP8.02□□□□□ -1.13
SYN3-204ENST00000441821 GNALP38405 381 aa8.02□□□□□ -1.13
SYN3-204ENST00000441821 RPS27P42677 84 aaKnown RBP8.02□□□□□ -1.13
SYN3-204ENST00000441821 GABRA2P47869 451 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms