RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 LY6G5BQ8NDX9 201 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 TRMT10AQ8TBZ6 339 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 DMRTB1Q96MA1 342 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 ELL3Q9HB65 397 aaPredicted RBP16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 SLC7A11Q9UPY5 501 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 POMT1Q9Y6A1 747 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 V9GYS6 101 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 IGKV1D-17A0A075B6S4 117 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 BTBD17A6NE02 478 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 FAM181BA6NEQ2 426 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 ANKRD61A6NGH8 418 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 DHRS7CA6NNS2 312 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 SLC1A7O00341 560 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 EI24O14681 340 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 PAHP00439 452 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 PRB3Q04118 309 aaPredicted RBP16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 ACP7Q6ZNF0 438 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 KRT74Q7RTS7 529 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 POC1AQ8NBT0 407 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 ZNRF1Q8ND25 227 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 OR14K1Q8NGZ2 314 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 C8orf46Q8TAG6 207 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 NPRL2Q8WTW4 380 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 TAF15Q92804 592 aaKnown RBP eCLIP16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 EME1Q96AY2 570 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 ZNF488Q96MN9 340 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 CHIAQ9BZP6 476 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 PRDM13Q9H4Q3 707 aa16.34■□□□□ 0.21
SHROOM1-204ENST00000440118 FAM230AA0A1W2PPH8 454 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 A0A1W2PRD5 423 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 A0A1W2PRF3 423 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 A0A1W2PRM7 423 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 H0YAE9 185 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 SYNGR1O43759 233 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 GATBO75879 557 aaKnown RBP16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 SULT1C4O75897 302 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 FBP1P09467 338 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 ACTC1P68032 377 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 ACTA1P68133 377 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 NCR3LG1Q68D85 454 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 CATSPERDQ86XM0 798 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 C10orf67Q8IYJ2 551 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 BATF2Q8N1L9 274 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 OR4F5Q8NH21 305 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 OR14J1Q9UGF5 321 aa16.33■□□□□ 0.2
SHROOM1-204ENST00000440118 TRBV23-1A0A0A0MS06 115 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 A0A1B0GTI1 187 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 RFPL4AA6NLU0 287 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 SNTNA6NMZ2 147 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 RFPL4AL1F8VTS6 287 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 M0R1W7 72 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 SPRY1O43609 319 aaPredicted RBP16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 ALPLP05186 524 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 PGA5P0DJD9 388 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 MDKP21741 143 aaPredicted RBP16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 RAG2P55895 527 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 KLRD1Q13241 179 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 ZIK1Q3SY52 487 aaPredicted RBP16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 TP53I3Q53FA7 332 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 TMEM42Q69YG0 159 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 TRUB1Q8WWH5 349 aaKnown RBP16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 DPAGT1Q9H3H5 408 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 METTL8Q9H825 291 aaKnown RBP16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 ZNF222Q9UK12 451 aa16.32■□□□□ 0.2
SHROOM1-204ENST00000440118 A0A1W2PPH5 198 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 PQLC2LA1A4F0 135 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 POM121CA8CG34 1229 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 NPFFO15130 113 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 SERPINA3P01011 423 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 UBCP0CG48 685 aaKnown RBP16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 CCL1P22362 96 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 ALDH3A2P51648 485 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 METAP1DQ6UB28 335 aaPredicted RBP16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 C17orf107Q6ZR85 190 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 PIP4P2Q8N4L2 257 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 ZNF561Q8N587 486 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 RORBQ92753 470 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 RNFT2Q96EX2 444 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 SDSLQ96GA7 329 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 BEX1Q9HBH7 125 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 MAB21L2Q9Y586 359 aa16.31■□□□□ 0.2
SHROOM1-204ENST00000440118 LOC107986453A0A1B0GWG9 222 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 DAPL1A0PJW8 107 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 MEIOCA2RUB1 952 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 RNASEK-C17orf49H0YIS7 233 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 ENTPD6O75354 484 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 KNG1P01042 644 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 IGHV4-59P01825 116 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 OCM2P0CE71 109 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 OCMP0CE72 109 aaPredicted RBP16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 CEBPDP49716 269 aaPredicted RBP16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 DLX1P56177 255 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 CNN3Q15417 329 aaKnown RBP16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 LDLRAD3Q86YD5 345 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 CBR4Q8N4T8 237 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 CCDC54Q8NEL0 328 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 DYRK2Q92630 601 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 USE1Q9NZ43 259 aa16.3■□□□□ 0.2
SHROOM1-204ENST00000440118 A0A1B0GUS0 222 aa16.29■□□□□ 0.2
SHROOM1-204ENST00000440118 ANGPTL7O43827 346 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms